Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05486 and BL02479

See DNA alignment / Visit BSNT_05486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:38
# Commandline: needle
#    -asequence pep-align/BSNT_05486___alsD.1.5803.seq
#    -bsequence pep-align/BL02479___alsD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05486___alsD-BL02479___alsD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05486___alsD-BL02479___alsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05486___alsD
# 2: BL02479___alsD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     172/255 (67.5%)
# Similarity:   206/255 (80.8%)
# Gaps:           2/255 ( 0.8%)
# Score: 919.5
# 
#
#=======================================

BSNT_05486___      1 MKRESNIQVLRRGQKDQPVSQIYQVSTMTSLLDGVYDGDFELSEIPKYGD     50
                     ||..|..::::  ..|:.:.|:||||||.|||||:|||||.:||..::||
BL02479___als      1 MKSASKQKIIQ--PVDKNLDQVYQVSTMVSLLDGIYDGDFYMSEAKEHGD     48

BSNT_05486___     51 FGIGTFNKLDGELIGFDGEFYRLRSDGTATPVQNGDRSPFCSFTFFTPDM    100
                     |||||||:|||||||||||||||||||.|.|||..|.|||||..||.||:
BL02479___als     49 FGIGTFNRLDGELIGFDGEFYRLRSDGKAYPVQGSDCSPFCSLAFFRPDI     98

BSNT_05486___    101 THKIDAKMTREDFEKEINSMLPSRNLFYAIRIDGLFKKVQTRTVELQEKP    150
                     .|:|..:|..|.||:|:..::||.|||||||:||.||||:||||||||||
BL02479___als     99 YHEIKQRMPLEAFEEEMKRIMPSENLFYAIRMDGTFKKVKTRTVELQEKP    148

BSNT_05486___    151 YVPMVEAVKTQPIFNFDNVRGTIVGFLTPAYANGIAVSGYHLHFIDEGRN    200
                     |||||:|||:||||:|:::.||||||.||.|||||||||:|||||||.||
BL02479___als    149 YVPMVDAVKSQPIFDFNDITGTIVGFWTPQYANGIAVSGFHLHFIDEDRN    198

BSNT_05486___    201 SGGHVFDYVLEDCTVTISQKMNMNLRLPNTADFFNANLDNPDFAKDIETT    250
                     .|||||||.:|:|||.||||:|||||||||.|||.|:.:..|.|..||..
BL02479___als    199 VGGHVFDYEIEECTVQISQKLNMNLRLPNTQDFFQADFNKHDLAAGIEAA    248

BSNT_05486___    251 EGSPE    255
                     ||:||
BL02479___als    249 EGNPE    253


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.