Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03295 and BL02472
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence pep-align/BSNT_03295___kdgR.1.5803.seq
# -bsequence pep-align/BL02472___kdgR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03295___kdgR-BL02472___kdgR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03295___kdgR-BL02472___kdgR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03295___kdgR
# 2: BL02472___kdgR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity: 235/339 (69.3%)
# Similarity: 278/339 (82.0%)
# Gaps: 1/339 ( 0.3%)
# Score: 1214.0
#
#
#=======================================
BSNT_03295___ 1 MKKKTTGHTTIKDVAECAGVSKSTVSRYINGKIDAISPEKVKNIKKAIAE 50
||.|.|...||.:||..|||||||||||||||||||||:|||:|||||.|
BL02472___kdg 1 MKDKQTAKVTINEVAAHAGVSKSTVSRYINGKIDAISPKKVKSIKKAIEE 50
BSNT_03295___ 51 LNYRPSKMAQGLKIKKSKLIGFVVADITNPFSVAAFRGVEEVCDQYGYSI 100
||||||:||||||:||||:|||:|||||||||||..||||||||||||||
BL02472___kdg 51 LNYRPSQMAQGLKVKKSKVIGFLVADITNPFSVATLRGVEEVCDQYGYSI 100
BSNT_03295___ 101 MVCNTDNSPEKEREMLLKLEAHSVEGLILNATGENKDVLRAFAEQQIPTI 150
||||||||||||||||.||.||.:||||:|.||.|.|||.....|.:..:
BL02472___kdg 101 MVCNTDNSPEKEREMLHKLNAHYIEGLIINTTGRNNDVLLDLISQDVSIV 150
BSNT_03295___ 151 LIDRKLPDLKLDTVTTDNRWITKEILQKVYSKGYTDVALFTEPISSISPR 200
|:|||:|.||:|.|||:||.:|.:|:..:|.|||..|.||||||..||||
BL02472___kdg 151 LVDRKVPGLKIDAVTTNNREVTSQIVNLMYDKGYAQVGLFTEPIKGISPR 200
BSNT_03295___ 201 AERAAVYQEMASVQNVNGLVRLHEIDVKDKEQLKAALRSFHKEMPEQKKA 250
.|||:.|.|:|..:|..|...::|.||||||.|..:::|| .||.|.|||
BL02472___kdg 201 EERASAYTEIALERNAGGTPLVYEADVKDKESLLQSVKSF-LEMKEGKKA 249
BSNT_03295___ 251 ILALNGLIMLKIISCMEELGLRIPQDIGIAGFDDTEWYKLIGPGITTIAQ 300
||..|||:|||||||:.|||:.||:|:|||||||||||||||||||||||
BL02472___kdg 250 ILGNNGLLMLKIISCLYELGISIPEDVGIAGFDDTEWYKLIGPGITTIAQ 299
BSNT_03295___ 301 PSHDMGRTAMERVLKRIDGDKGAPQTIELEAKVIMRKSL 339
|||:|||.||||::|||:||:.|||||:|||::::|:||
BL02472___kdg 300 PSHEMGRVAMERIIKRIEGDESAPQTIQLEAELVLRQSL 338
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