Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03293 and BL02470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence pep-align/BSNT_03293___kdgA.1.5803.seq
# -bsequence pep-align/BL02470___kdgA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03293___kdgA-BL02470___kdgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03293___kdgA-BL02470___kdgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03293___kdgA
# 2: BL02470___kdgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 204
# Identity: 119/204 (58.3%)
# Similarity: 150/204 (73.5%)
# Gaps: 8/204 ( 3.9%)
# Score: 598.0
#
#
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BSNT_03293___ 1 MESKV---VENRLKEAKLIAVIRSKDTQEACQQIESLLDKGIRAVEVTYT 47
||..: |:.:|.||.||||:|:...:.|.:.|..|:||||.|:|:|||
BL02470___kdg 1 MEMSMIGKVQEQLGEAGLIAVVRADGKEAAEETIHRLIDKGITAIEITYT 50
BSNT_03293___ 48 TPGASDIIESFRNREDILIGAGTVITAQQAGEAAEAGAQFIVSPGFSADL 97
|||||::||.|..::.:|:|||||:.::||.|||.||::||||||||..|
BL02470___kdg 51 TPGASELIEKFAGKDGLLVGAGTVVESEQAREAAAAGSKFIVSPGFSESL 100
BSNT_03293___ 98 AEHLSFVKTHYIPGVLTPSEIMEALTFGFTTLKLFPSGVFGIPFMKNLAG 147
||..:.:.|.:|||||||||||||::.||..|||||.|..|||:||||||
BL02470___kdg 101 AEEAASLHTFFIPGVLTPSEIMEAVSKGFRVLKLFPGGTSGIPYMKNLAG 150
BSNT_03293___ 148 PFPQVTFIPTGGIHPSEVPDWLRAGAGAVGVGSQLGSCSKEDLQAVFQV- 196
|||:|.|||||||||.:|..||.|||.||||||||...|:.|||.:||.
BL02470___kdg 151 PFPKVRFIPTGGIHPGDVEKWLDAGALAVGVGSQLNKVSEADLQRIFQRR 200
BSNT_03293___ 196 ---- 196
BL02470___kdg 201 AQQK 204
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