Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03293 and BL02470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_03293___kdgA.1.5803.seq
# -bsequence dna-align/BL02470___kdgA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03293___kdgA-BL02470___kdgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03293___kdgA-BL02470___kdgA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03293___kdgA
# 2: BL02470___kdgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 653
# Identity: 400/653 (61.3%)
# Similarity: 400/653 (61.3%)
# Gaps: 100/653 (15.3%)
# Score: 1034.0
#
#
#=======================================
BSNT_03293___ 1 ATGGAGTCCAAAGT---TGTT--GAAAACCGT----------CTGAAAGA 35
||||| ||.|| ||.| ||||| || |||...||
BL02470___kdg 1 ATGGA----AATGTCTATGATCGGAAAA--GTGCAAGAGCAGCTGGGCGA 44
BSNT_03293___ 36 AGCAAAGCTGATTGCAGTCATTCGTTCAAAGGATACACAGGAGGC--CTG 83
.||...||||||.||||||.|.||..||.|.|.|| ||||||| |||
BL02470___kdg 45 GGCCGGGCTGATCGCAGTCGTCCGCGCAGACGGTA---AGGAGGCTGCTG 91
BSNT_03293___ 84 TCAGCAG---ATTGAGAGTTTGTTAGATAAAGGGATTCGTGCAGTTGAAG 130
||.|| |||.|.||..||.|.||.|||||||||..|||..|||||.
BL02470___kdg 92 --AGGAGACCATTCACAGACTGATCGACAAAGGGATTACTGCGATTGAAA 139
BSNT_03293___ 131 TGACGTATACAACCCCCGGGGCATCAGATATTATCGAATCCTT--CCGTA 178
|.||.|||||.||.||.||.||.||.||..|.||.|||...|| |.|.|
BL02470___kdg 140 TCACATATACGACGCCGGGAGCGTCTGAGCTGATTGAAAAATTTGCGGGA 189
BSNT_03293___ 179 ATAGGGAAGATATTTTAATTGGCGCGGGCACTGT-CATCACCGCGCAGCA 227
|.| ||.|.|.||.|..|.||.|||||.||.|| ..|.|..||| |.||
BL02470___kdg 190 AAA--GACGGTCTTCTTGTCGGAGCGGGAACGGTGGTTGAAAGCG-AACA 236
BSNT_03293___ 228 AGCTGGGGAAGCTGCTGAGGCTGGCGCGCAGTTTATTGTCAGTCCGGGTT 277
.||..|||||||.||.|..||.||..|..|.|||||.|||||.|||||||
BL02470___kdg 237 GGCGAGGGAAGCCGCGGCAGCGGGGTCAAAATTTATCGTCAGCCCGGGTT 286
BSNT_03293___ 278 TTTCAGCTGAT--CTTGCTGA-------ACATCTATCTTTTGTAAAGACA 318
||||.| .|| ||.||||| .|||| || |..|.|||
BL02470___kdg 287 TTTCGG--AATCACTGGCTGAGGAGGCCGCATC-AT------TGCATACA 327
BSNT_03293___ 319 CATTATATCCCCGGCGTCTTGACTCCGAGCGAAATTATGGAAGCGCTGAC 368
..||.|||.||||||||.||.||.||.||||||||||||||||||.|..|
BL02470___kdg 328 TTTTTTATTCCCGGCGTATTAACGCCAAGCGAAATTATGGAAGCGGTCTC 377
BSNT_03293___ 369 A-------TTCGGTTTTACGACATTAAAGCTGTTCCCAAGCGGTGTGTTT 411
| |||||.|| .|.||||||||.|||.|.||....|..
BL02470___kdg 378 AAAGGGTTTTCGGGTT-------CTTAAGCTGTTTCCAGGGGGAACATCC 420
BSNT_03293___ 412 GGCATCCCGTTTATGAAAAATTTAGCGGGTCCTTTCCCGCAGGTGACCTT 461
||.||.||.|..|||||.||..|.||.||||||||.|||.||||....||
BL02470___kdg 421 GGGATTCCTTACATGAAGAACCTCGCCGGTCCTTTTCCGAAGGTTCGGTT 470
BSNT_03293___ 462 TATTCCGACAGGCGGGATACAT-CCGTCTGAAGTGCCGGATTGGCTTAGA 510
.||.||.||.||.||.||.||| |||.| ||.|||..|.|.|||||| ||
BL02470___kdg 471 CATACCAACCGGAGGAATCCATCCCGGC-GATGTGGAGAAGTGGCTT-GA 518
BSNT_03293___ 511 -GCCGGAGC--TGGCGCCGTTGGAGTCGGCAGCCAGCTGGGC--AGCTGT 555
|||||||| || ||.||.||.||.||.|||||||||..| || ||
BL02470___kdg 519 TGCCGGAGCATTG--GCAGTAGGTGTGGGAAGCCAGCTGAACAAAG-TG- 564
BSNT_03293___ 556 TCAAAAGAGGATTTGCAG-GCTGTTTTCCAAGTG---------------- 588
|||.|||.||||.|.||| ||...|||| ||.|
BL02470___kdg 565 TCAGAAGCGGATCTCCAGCGCATCTTTC--AGCGGCGGGCTCAGCAGAAA 612
BSNT_03293___ 589 TAA 591
|||
BL02470___kdg 613 TAA 615
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