Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03291 and BL02469

See DNA alignment / Visit BSNT_03291 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:58
# Commandline: needle
#    -asequence pep-align/BSNT_03291___kdgT.1.5803.seq
#    -bsequence pep-align/BL02469___kdgT.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03291___kdgT-BL02469___kdgT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03291___kdgT-BL02469___kdgT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03291___kdgT
# 2: BL02469___kdgT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 332
# Identity:     296/332 (89.2%)
# Similarity:   312/332 (94.0%)
# Gaps:           9/332 ( 2.7%)
# Score: 1466.0
# 
#
#=======================================

BSNT_03291___      1 MKIKATIERVPGGMMIIPLFLGAALNTFAPGTAEFFGGFTGALITGTLPI     50
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BL02469___kdg      1 MKIKATIERVPGGMMIIPLFLGATLNTFAPGTAEFFGGFTGALITGTLPI     50

BSNT_03291___     51 LGVFIFCVGATIDFRSSGYIARKGITLLLGKVGFAALLGVIAAQFIPDEG    100
                     ||||||||||||||||||||||||:|||:||||||||||:||||||||||
BL02469___kdg     51 LGVFIFCVGATIDFRSSGYIARKGLTLLIGKVGFAALLGLIAAQFIPDEG    100

BSNT_03291___    101 IQSGFFAGLSVLAIVVVMNETNGGLYLALMNHMGRKEDAGAFAFISTESG    150
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BL02469___kdg    101 IQSGFFAGLSVLAIVAVMNETNGGLYLALMNHMGRKEDAGAFAFISTESG    150

BSNT_03291___    151 PFMTMVTFGVTGLAAFPWETLAATVIPFLLGCILGNLDHDLRDLFSKVVP    200
                     ||||||||||||||||||||||||||||||||||||||.:|||||.||||
BL02469___kdg    151 PFMTMVTFGVTGLAAFPWETLAATVIPFLLGCILGNLDPELRDLFGKVVP    200

BSNT_03291___    201 AIIPFFAFSLGNTLNFGMLIQSGLLGIFIGVSVVILSGSSLFLLDRFIAR    250
                     ||||||||||||||:|.||||||||||.:|||||||||:||:|||||:||
BL02469___kdg    201 AIIPFFAFSLGNTLDFNMLIQSGLLGIVVGVSVVILSGASLYLLDRFVAR    250

BSNT_03291___    251 GDGVAGVAA--XAGAAVAVPYALAEANASFAPVAESATAIIATSVIVTSL    298
                     |||||||||   ||||||||||||:||..|||||:|||||||||||||||
BL02469___kdg    251 GDGVAGVAASSTAGAAVAVPYALADANPVFAPVADSATAIIATSVIVTSL    300

BSNT_03291___    299 LTPLATVWVDKKIKQKKRRTPPPKNQMTIN--    328
                     ||||||||::|:.||:|    .|| ||||:  
BL02469___kdg    301 LTPLATVWIEKRTKQRK----SPK-QMTIDYK    327


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.