Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03291 and BL02469
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:58
# Commandline: needle
# -asequence dna-align/BSNT_03291___kdgT.1.5803.seq
# -bsequence dna-align/BL02469___kdgT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03291___kdgT-BL02469___kdgT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03291___kdgT-BL02469___kdgT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03291___kdgT
# 2: BL02469___kdgT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1003
# Identity: 755/1003 (75.3%)
# Similarity: 755/1003 (75.3%)
# Gaps: 35/1003 ( 3.5%)
# Score: 2812.5
#
#
#=======================================
BSNT_03291___ 1 ATGAAAATCAAGGCGACAATTGAACGGGTACCTGGCGGAATGATGATTAT 50
||||||||.||.||.||.||||||||.||.||.|||||.||||||||.||
BL02469___kdg 1 ATGAAAATTAAAGCAACGATTGAACGTGTGCCGGGCGGCATGATGATCAT 50
BSNT_03291___ 51 TCCGCTATTTCTTGGAGCGGCGCTCAACACGTTTGCGCCTGGAACAGCGG 100
||||||.|||||.||.||..||||.||.||.|||||.||.|||||.||.|
BL02469___kdg 51 TCCGCTCTTTCTGGGCGCAACGCTGAATACATTTGCACCGGGAACCGCAG 100
BSNT_03291___ 101 AGTTCTTTGGAGGGTTTACGGGTGCTTTGATTACCGGAACGCTGCCGATA 150
||||.||.||.||.|||||.||.||..||||||||||||||||||||||.
BL02469___kdg 101 AGTTTTTCGGCGGATTTACAGGCGCCCTGATTACCGGAACGCTGCCGATT 150
BSNT_03291___ 151 CTGGGTGTTTTTATCTTTTGCGTAGGAGCAACGATTGATTTTCGTTCTTC 200
.|.||.||.||||||||||||||.||.||.||.||.||||||||||||||
BL02469___kdg 151 TTAGGAGTATTTATCTTTTGCGTTGGCGCGACAATAGATTTTCGTTCTTC 200
BSNT_03291___ 201 AGGCTATATCGCAAGAAAAGGAATTACG-TTATTATTGGGAAAGGTCGGA 249
|||.|||||.||.||.||.||..|.||| ||.|.||.||.||| |||||.
BL02469___kdg 201 AGGATATATTGCGAGGAAGGGGCTGACGCTTCTGATCGGCAAA-GTCGGC 249
BSNT_03291___ 250 TTTGCGGCACTGCTCGGCGTGATCGCAGCGCAATTTATACCTGACGAAGG 299
|||||.|||.|..|.||..|||||||||||||.||.||.||.||||||||
BL02469___kdg 250 TTTGCCGCATTATTGGGTTTGATCGCAGCGCAGTTCATTCCAGACGAAGG 299
BSNT_03291___ 300 CATACAATCCGGCTTTTTTGCAGGCCTTTCTGTTTTAGCAATTGTCGTGG 349
|||.|||..|||.||||||||.||.||.||.||..|.||.||.||.|..|
BL02469___kdg 300 CATTCAAAGCGGGTTTTTTGCCGGACTGTCCGTGCTGGCGATCGTAGCCG 349
BSNT_03291___ 350 TAATGAATGAAACGAACGGCGGACTGTATTTGGCGCTCATGAATCACATG 399
|.||||||||||||||||||||.||||||||||||.|.||||||||||||
BL02469___kdg 350 TTATGAATGAAACGAACGGCGGTCTGTATTTGGCGTTAATGAATCACATG 399
BSNT_03291___ 400 GGAAGAAAAGAGGATGCGGGCGCTTTCGCCTTTATCAGTACAGAATCTGG 449
||||||||.||.||.||.||.|||||.|||||||||||.||.|||||.||
BL02469___kdg 400 GGAAGAAAGGAAGACGCCGGTGCTTTTGCCTTTATCAGCACGGAATCAGG 449
BSNT_03291___ 450 TCCTTTTATGACCATGGTGACGTTTGGTGTGACGGGACTTGCCGCATTCC 499
.||.||||||||.|||||.||.||.||||||||.||.|||||.|||||.|
BL02469___kdg 450 CCCGTTTATGACGATGGTCACTTTCGGTGTGACAGGGCTTGCGGCATTTC 499
BSNT_03291___ 500 CATGGGAAACGCTGGCAGCGACAGTCATCCCGTTTTTACTTGGATGTATA 549
|.|||||.||||||||.||.||.|||||||||||||||||.||.||.||.
BL02469___kdg 500 CTTGGGAGACGCTGGCTGCAACCGTCATCCCGTTTTTACTCGGCTGCATT 549
BSNT_03291___ 550 CTTGGAAATCTGGATCATGATCTCAGAGACTTATTCAGCAAGGTTGTGCC 599
||.||.||.||.||.|.|||..|..|.||.||.|||.|.||.||.||.||
BL02469___kdg 550 CTCGGTAACCTTGACCCTGAATTGCGCGATTTGTTCGGAAAAGTCGTACC 599
BSNT_03291___ 600 GGCGATCATTCCATTTTTCGCCTTTTCGCTCGGCAATAC-CTTGAATTTT 648
||||||||||||.||.|||||.|||||.||.||.||.|| |||| |||||
BL02469___kdg 600 GGCGATCATTCCGTTCTTCGCATTTTCACTTGGAAACACGCTTG-ATTTT 648
BSNT_03291___ 649 GGAATGCTGATCCAATCAGGGCTGCTCGGCATTTTTATCGGAGTTTCTGT 698
...|||.||||.|||||.||.||..|.||||||.||.||||.||.||.||
BL02469___kdg 649 AACATGTTGATTCAATCCGGCCTTTTAGGCATTGTTGTCGGCGTATCAGT 698
BSNT_03291___ 699 CGTCATTTTATCGG--GCAGTTCTTTGTTTTTGCTTGATCGTTTTATTGC 746
|||||||.|.|||| ||| |||.|.|..|||||.||.||.|||.|.||
BL02469___kdg 699 CGTCATTCTCTCGGGTGCA--TCTCTATACTTGCTGGACCGCTTTGTCGC 746
BSNT_03291___ 747 GCGGGGAGACGGTGTCGCGGGAGTGGCCG------CTNCGGCGGGGGCGG 790
..|.||||||||||||||||||||.||.| |. ||||.|||||.|
BL02469___kdg 747 AAGAGGAGACGGTGTCGCGGGAGTAGCGGCGTCATCAACGGCCGGGGCTG 796
BSNT_03291___ 791 CTGTAGCCGTGCCATATGCATTAGCGGAAGCGAATGCCTCATTTGCGCCA 840
|.||||||||.||.||||||.|.||.||.||.||..||...||||||||.
BL02469___kdg 797 CGGTAGCCGTCCCGTATGCACTTGCCGATGCAAACCCCGTGTTTGCGCCG 846
BSNT_03291___ 841 GTTGCTGAGTCGGCAACTGCAATTATCGCGACAAGCGTTATTGTCACCTC 890
||.|||||.||.|||||.||.||.||||||||||||||.|||||||||||
BL02469___kdg 847 GTAGCTGATTCAGCAACCGCGATCATCGCGACAAGCGTCATTGTCACCTC 896
BSNT_03291___ 891 GCTCTTAACCCCGCTGGCAACAGTGTGGGTAGATAAAAAAATCAAGCAGA 940
|||..|.||.|||||.|||||.||.|||.|.||.||| |.||
BL02469___kdg 897 GCTTCTGACGCCGCTTGCAACCGTCTGGATCGAAAAA---------CGGA 937
BSNT_03291___ 941 AAAAGCGGAGAACACCTCCGCCAAAAAATCAAATGACGAT------CAAC 984
..||.|..||||.|.||||| ||.||||||||||| |||.
BL02469___kdg 938 CGAAACAAAGAAAATCTCCG------AAACAAATGACGATTGATTACAAG 981
BSNT_03291___ 985 TGA 987
|.|
BL02469___kdg 982 TAA 984
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