Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05457 and BL02466
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence pep-align/BSNT_05457___pmi.1.5803.seq
# -bsequence pep-align/BL02466___pmi.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05457___pmi-BL02466___pmi.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05457___pmi-BL02466___pmi.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05457___pmi
# 2: BL02466___pmi
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 316
# Identity: 235/316 (74.4%)
# Similarity: 271/316 (85.8%)
# Gaps: 0/316 ( 0.0%)
# Score: 1327.0
#
#
#=======================================
BSNT_05457___ 1 MTQSPIFLTPVFKEKIWGGTALRDRFGYSIPSESTGECWAISAHPKGPST 50
||||||||.|.|||:||||||||:.|||.|||:.|||||||||||.||:.
BL02466___pmi 1 MTQSPIFLQPEFKERIWGGTALRESFGYDIPSDLTGECWAISAHPNGPNI 50
BSNT_05457___ 51 VANGPYKGKTLIELWEEHREVFGGVEGDRFPLLKKLLDVKEGTSIKVHPD 100
||:||||||||.|||:||||:|||.||||||||.|:||..:..|::||||
BL02466___pmi 51 VASGPYKGKTLAELWDEHRELFGGAEGDRFPLLTKILDANQDLSVQVHPD 100
BSNT_05457___ 101 DYYAGENEEGELGKTECWYIIDCKENAEIIYGHTARSKTELVTMINSGDW 150
||||||:|.||||||||||||||||.|||:||||||::||||||||||||
BL02466___pmi 101 DYYAGEHENGELGKTECWYIIDCKEGAEIVYGHTARTRTELVTMINSGDW 150
BSNT_05457___ 151 EGLLRRIKIKPGDFYYVPSGTLHALCKGALVLETQQNSDATYRVYDYDRV 200
:.|||||||||||||||||||:||||:|.:||||||:||.|||||||||.
BL02466___pmi 151 DNLLRRIKIKPGDFYYVPSGTIHALCEGTVVLETQQSSDTTYRVYDYDRT 200
BSNT_05457___ 201 DDNGKPRELHFAKAVNAATVPHVDGYIDESTESRKGITIKTFVQGEYFSV 250
|.||:.||||..:|:|..||||||.|:|||||::|||||||||:.|||||
BL02466___pmi 201 DQNGEKRELHLTQAINVTTVPHVDSYVDESTETQKGITIKTFVEAEYFSV 250
BSNT_05457___ 251 YKWDINGEAEMAQDESFLICSVIEGSGLLMYERETCPLKKGDHFIMPAQM 300
|||:|:|.||:.||..||:||||||.|.|....|..|:.||.:||:||:.
BL02466___pmi 251 YKWEIDGAAELTQDAPFLLCSVIEGEGKLTQGGELFPISKGTNFILPAET 300
BSNT_05457___ 301 PDFTIKGTCTLIVSHI 316
.||||:|||.||||||
BL02466___pmi 301 NDFTIEGTCELIVSHI 316
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