Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05457 and BL02466
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:36
# Commandline: needle
# -asequence dna-align/BSNT_05457___pmi.1.5803.seq
# -bsequence dna-align/BL02466___pmi.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05457___pmi-BL02466___pmi.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05457___pmi-BL02466___pmi.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05457___pmi
# 2: BL02466___pmi
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 981
# Identity: 708/981 (72.2%)
# Similarity: 708/981 (72.2%)
# Gaps: 60/981 ( 6.1%)
# Score: 2430.0
#
#
#=======================================
BSNT_05457___ 1 ATGACGCAATCACCGATTTTTCTAACGCCTGTGTTTAAAGAAAAAATCTG 50
|||||.|||||||||||.|||||...|||||.|||||||||.|.||||||
BL02466___pmi 1 ATGACTCAATCACCGATATTTCTGCAGCCTGAGTTTAAAGAGAGAATCTG 50
BSNT_05457___ 51 GGGCGGAACCGCTTTACGAGATAGATTTGGATACAGTATTCCTTCAGAAT 100
|||.|||||.|||||.||.||...|||.||.||....|||||.||.||.|
BL02466___pmi 51 GGGGGGAACGGCTTTGCGCGAGTCATTCGGCTATGACATTCCCTCCGATT 100
BSNT_05457___ 101 CAACGGGGGAATGCTGGGCCATTTCCGCTCATCCAAAAGGACCGAGCACT 150
..||.||.||||||||||||||||||||.||||||||.||.||||.||..
BL02466___pmi 101 TGACAGGTGAATGCTGGGCCATTTCCGCCCATCCAAACGGTCCGAACATC 150
BSNT_05457___ 151 GTTGCAAATGGCCCGTATAAAGGAAAGAC-ATTGATCGAGCTTTGGGAAG 199
|||||....||.||.||.||||||||.|| .||| .||||||||||||.|
BL02466___pmi 151 GTTGCTTCAGGTCCTTACAAAGGAAAAACGCTTG-CCGAGCTTTGGGACG 199
BSNT_05457___ 200 AGCACCGTGAAGTATTCGGCGGTGTAGAGGGGGATCGGTTCCCGCTTCT- 248
|.|||||||||.|.||.||.||||.|||||||||.||.||||||||..|
BL02466___pmi 200 AACACCGTGAATTGTTTGGAGGTGCAGAGGGGGACCGTTTCCCGCTGTTA 249
BSNT_05457___ 249 --GAAAAAGCTGCTGGATGTGAAGGAAGGTAC--GTCAATTAAAGTTCAC 294
||||| |.||.||||..||..||| || .||..||.||||.|||
BL02466___pmi 250 ACGAAAA---TACTTGATGCCAATCAAG--ACCTTTCCGTTCAAGTCCAC 294
BSNT_05457___ 295 CCTGATGATTACTATGCCGGAGAAAACGAAGAGGGAGAACTCGGCAAGAC 344
||.|||||.||.|||||.|||||..|||||.|.||.||||||||.|||||
BL02466___pmi 295 CCGGATGACTATTATGCAGGAGAGCACGAAAACGGGGAACTCGGTAAGAC 344
BSNT_05457___ 345 GGAATGCTGGTACATTATCGACTGTAAGGAAAACGCAGAAATCATTTACG 394
.|||||||||||.||.|||||.||.||.|||...|||||.|||.||||||
BL02466___pmi 345 AGAATGCTGGTATATCATCGATTGCAAAGAAGGAGCAGAGATCGTTTACG 394
BSNT_05457___ 395 GGCATACGGCCCGCTCAAAA-----ACCGAACTTGTCACAATGATCAACA 439
|.||.||||| .|.|| ||.|||||.|||||.||||||||||
BL02466___pmi 395 GCCACACGGC-----GAGAACGCGGACTGAACTGGTCACCATGATCAACA 439
BSNT_05457___ 440 GCGGTGACTGGGAGGGCCTGCTGCGAAGAATCAAAATTAAACCGGGTGAT 489
|||||||.|||||...||||.|..|..|.||||||||.||||||||.|||
BL02466___pmi 440 GCGGTGATTGGGACAACCTGTTAAGGCGGATCAAAATCAAACCGGGCGAT 489
BSNT_05457___ 490 TTCTATTATGTGCCGAGCGGAACGCTGCATGCATTGTGCAAGGGGGCCCT 539
||.|||||||||||.|||||.|||.|.||.||..|.|||.|||||.|..|
BL02466___pmi 490 TTTTATTATGTGCCAAGCGGCACGATTCACGCTCTTTGCGAGGGGACGGT 539
BSNT_05457___ 540 TGTTTTAGAGACTCAGCAAAATTCAGATGCCACATACCGGGTGTACGATT 589
.|||||.|||||.|||||.|..||.|||.|.||.|||.||||.||.||||
BL02466___pmi 540 CGTTTTGGAGACACAGCAGAGCTCCGATACGACGTACAGGGTATATGATT 589
BSNT_05457___ 590 ATGACCGGGTTGATGACAACGG---GAAGCCAAGAGAGCTTCATTTTGCC 636
||||||||...|||.|.||||| .|||| |.||.||||| ..||.|
BL02466___pmi 590 ATGACCGGACCGATCAAAACGGAGAAAAGC---GCGAACTTCA-CCTGAC 635
BSNT_05457___ 637 A-AAGCGGTCAATGCCGCCACGGTTCCCCATGTGGACGGGTATATTGATG 685
| |.|||.||||||.|.|.||.||.||.|||||.|||.|.|||.||||.|
BL02466___pmi 636 ACAGGCGATCAATGTCACAACAGTACCGCATGTAGACAGCTATGTTGACG 685
BSNT_05457___ 686 AATCGACCGAA--TCAAGAAAAGGAATAACCATTAAAACGTTTGTCCAAG 733
|||||||.||| ||| ||||||.||.||||||||.||.|||||..|||
BL02466___pmi 686 AATCGACAGAAACTCA--AAAAGGCATTACCATTAAGACATTTGTTGAAG 733
BSNT_05457___ 734 GGGAATATTTTTCGGTGTATAAATGGGACATCAATGGCGAAGCTGAAATG 783
..||||||||.||.||.|||||||||||.|||.|.||.|..|||||..||
BL02466___pmi 734 CCGAATATTTCTCCGTATATAAATGGGAGATCGACGGTGCCGCTGAGCTG 783
BSNT_05457___ 784 GCTCAGGATGAATCCTTT-CTGATTTGCAGCGTGATAGAAGG-------A 825
.|.||||||| ..||||| ||..|.|||||||||||.||||| |
BL02466___pmi 784 ACCCAGGATG-CCCCTTTCCTCCTGTGCAGCGTGATTGAAGGAGAAGGAA 832
BSNT_05457___ 826 AGCGGTTTGCTGATGTATGAGAGAGAAACATGTCCGCTCAAAAAAGG--C 873
||| |..||.|.| |.| |.|||..||.||||.|||..||||| |
BL02466___pmi 833 AGC---TCACTCAGG---GCG-GCGAATTATTTCCGATCAGCAAAGGGAC 875
BSNT_05457___ 874 GATCACTTTATTATGCCGGCTCAAATGCCC---GATTTTACGATAAAAGG 920
.| |.|||||..|||||||..||| || ||.|||||.|||.||||
BL02466___pmi 876 AA--ATTTTATCCTGCCGGCGGAAA---CCAATGACTTTACAATAGAAGG 920
BSNT_05457___ 921 AACTTGTACCCTTATCGTGTCTCATATTTAA 951
|||.|||...||.||||||||.||.||.|||
BL02466___pmi 921 AACATGTGAACTAATCGTGTCACACATATAA 951
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