Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05456 and BL02465

See DNA alignment / Visit BSNT_05456 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:35
# Commandline: needle
#    -asequence pep-align/BSNT_05456___lytD.1.5803.seq
#    -bsequence pep-align/BL02465___lytD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05456___lytD-BL02465___lytD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05456___lytD-BL02465___lytD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05456___lytD
# 2: BL02465___lytD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 885
# Identity:     426/885 (48.1%)
# Similarity:   589/885 (66.6%)
# Gaps:          14/885 ( 1.6%)
# Score: 2194.5
# 
#
#=======================================

BSNT_05456___      1 ----MKKRLIAPMLLSAASLAFFAISGSAQAAAYTDYSLYQVEPSNTFST     46
                         .|..:.|.::|    |...|:......|||||.|:|::|.:..|::
BL02465___lyt      1 MKNIRKTVIFAAIIL----LVHTAVPAIPALAAYTDTSVYKIETAKEFNS     46

BSNT_05456___     47 ESQASQAVAKLEKDTGWDASYQASGTT-TTYQISASGIHSESEAKAILSG     95
                     ||:|.:|..:|:|||||.|..:.||.. |||.:::.|:..||.||.:|..
BL02465___lyt     47 ESEALKAAEQLKKDTGWKAEVKPSGKNGTTYVLTSEGVEGESRAKNLLLQ     96

BSNT_05456___     96 LAKQTSITGTSSPVGSKQPYVTISSGAISGEKQANTVLAKLKQETGVAGA    145
                     ..|:|.:..:..|:|.|:|:....|...:||::|.....:.::|||:...
BL02465___lyt     97 FEKETGLKASYGPIGKKEPFSKAVSKEFAGEEKAKEWALQFEKETGLKAT    146

BSNT_05456___    146 VKAYGAAQPYMNVMTSDIADETKVKALIQNLAKQTGIKSSYQPITHTVSV    195
                     ....|..:.|:.|.|..|..|...||::....|.||:|:||.|.....::
BL02465___lyt    147 YTLAGNREAYVKVATGGIEGEDNTKAILDRFQKATGLKASYAPYGAGQAI    196

BSNT_05456___    196 TTIRSGTIVGDSRAAQIKKAFQKESGLKASLKETVKGQAYYTFTTAAISG    245
                     ..:.|..|..:|:|..:...|:||:.||.:::...|.|..|...|::|.|
BL02465___lyt    197 VKLYSAEIADESKAKSLLVQFEKETALKGTIETVKKQQPKYKIATSSIQG    246

BSNT_05456___    246 EANAKTLLQQLKQSTGITGSYKSINQKTTVESYNVQSAYFKGLNTVKDAI    295
                     |.|||.||:|.::...:.|:|::..|  ..:.|||:|.||....:.|:|.
BL02465___lyt    247 ETNAKNLLKQFEKELKVKGAYEAAGQ--PAQLYNVKSGYFNDEKSAKNAA    294

BSNT_05456___    296 SQIKKNTGVSGSYQQVGKSTSYTVNMKGITKQQLQKVDTFFKKKKWHYTS    345
                     .||||.||::.|.::|..:..:.|:||.:..|.|:|:|.|||||.|.||:
BL02465___lyt    295 GQIKKKTGLASSTEKVKGTRFWIVSMKSVDSQNLKKIDAFFKKKTWRYTA    344

BSNT_05456___    346 SSVKKTTTSAAYQITTAKMLGEQQANKAAAFFAQKKVKATKTAAGSTAEN    395
                     :...|..||  ::|.:..:..:::||....||..|.::|:..:.|||..:
BL02465___lyt    345 AKAGKKQTS--FRIVSVPLSDQKKANDGIRFFKNKNIQASAQSTGSTTVS    392

BSNT_05456___    396 QYQLISEETSDQAKVTKGLNILKKNQLSASAKSVKKQIADTFKITTESLF    445
                     ::::.|.||:.||::.|||...|||..:.:|.|..|::...:::||||::
BL02465___lyt    393 RFRIASAETAVQARINKGLEFFKKNGAAGTAGSTGKKVYSHYQLTTESVY    442

BSNT_05456___    446 DQTKVNQALTFFKSNHISAASQKTGQTAASSYQITTEAIISQEEIDRVLT    495
                     :|.||.|||.|||...|.|.:.|||| ..|.|::::||:|..|::.:.|.
BL02465___lyt    443 EQNKVTQALNFFKETGIHAEAVKTGQ-YYSRYKLSSEALIGTEQLQQALG    491

BSNT_05456___    496 FFKQNHIAVTTSKTGQTAYTQYKIVTTQLSSKTALNNGLTYLKSKSVTPS    545
                     ||.:.:|.....:||:..|.||::.|.:::||..|:.||...|..:|:.:
BL02465___lyt    492 FFSKRNIPGKIEQTGEYGYRQYRVTTGRITSKADLDKGLNVFKKNNVSAT    541

BSNT_05456___    546 YTTKSNTLYKISVNEQFTGNDTAAAASTKLKQLYGWTSSIVKIKNGPQIM    595
                     |.||:.:|:.||:||||||.|.|.||:.::|..|||..::||:||||||.
BL02465___lyt    542 YQTKTVSLFHISINEQFTGKDRADAAANRIKTNYGWPVNVVKVKNGPQIT    591

BSNT_05456___    596 KTNYNLSLRDMVQKQMTVSPQTDGAAYVSLTYINTATSTVTADVLNIRST    645
                     .|:|.::|..|:.|||.||||||..|||||:|||||..|||||:|||||:
BL02465___lyt    592 TTDYGITLSQMIDKQMKVSPQTDAPAYVSLSYINTANQTVTADLLNIRSS    641

BSNT_05456___    646 PEVSPTNVIGQFKKGDKVKIIGQINGWAKINLGWRNASSDEVVQYVDPNN    695
                     |.|:..|:|||.:|||||.||.|.||||||.:.|||||.|||.:||:|.|
BL02465___lyt    642 PLVTGGNIIGQLQKGDKVNIISQENGWAKIRMNWRNASRDEVEKYVNPEN    691

BSNT_05456___    696 FTRDSKYYFQFLKLSQTAGLSVTEVNQKVLAGKGILTGRAKAFIDAANQY    745
                     ||:||..|||||||||||||:..|||.|:|..||:|||:.:||||||..|
BL02465___lyt    692 FTQDSSAYFQFLKLSQTAGLNAAEVNAKILYNKGVLTGKGQAFIDAARAY    741

BSNT_05456___    746 SINELYLISHALLETGNGTSALANGLTYNGKKVYNMYGIGAYDSNPNYYG    795
                     ||||||||||:|||||||||.||.|..:||||||||||:|||||||.|||
BL02465___lyt    742 SINELYLISHSLLETGNGTSELAKGTMFNGKKVYNMYGVGAYDSNPLYYG    791

BSNT_05456___    796 AKYAYEQGWFTPEAAIIGGAKFIGSSYIHNTAYNQDTLYKMRWSATATHQ    845
                     ||||||||||||||||:|||||||..|||:..|.||||||||||..|.||
BL02465___lyt    792 AKYAYEQGWFTPEAAIMGGAKFIGEKYIHHPTYKQDTLYKMRWSPNALHQ    841

BSNT_05456___    846 YATDIGWAYKQVNRMYSLYSLLDGYTLYFDVPEYR    880
                     ||||:|||.|||.||||||:|||.||||:|||.||
BL02465___lyt    842 YATDVGWACKQVGRMYSLYTLLDQYTLYYDVPVYR    876


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05456 and BL02465

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
