Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05536 and BL02448

See DNA alignment / Visit BSNT_05536 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:39
# Commandline: needle
#    -asequence pep-align/BSNT_05536___ywqB.1.5803.seq
#    -bsequence pep-align/BL02448___ywqB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05536___ywqB-BL02448___ywqB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05536___ywqB-BL02448___ywqB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05536___ywqB
# 2: BL02448___ywqB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 536
# Identity:     337/536 (62.9%)
# Similarity:   427/536 (79.7%)
# Gaps:           4/536 ( 0.7%)
# Score: 1832.0
# 
#
#=======================================

BSNT_05536___      1 MLQNMISKDDVLASAEQLKELLPYNEENVQLIKKALILYRQDSVYRLQAV     50
                     |||:||||..|:.:|||.|.:||..|||:||:||||||||||||||::.:
BL02448___ywq      1 MLQDMISKTVVMDAAEQFKHVLPCTEENIQLMKKALILYRQDSVYRVKPM     50

BSNT_05536___     51 SPTEVTAYVQDVVPVRVTLNLFVIVKSGCSCPSGRICRHMLAVFLYVYAM    100
                     |...|:|||||||||:|.::|..:.||.||||:..:|||:|||:||:||.
BL02448___ywq     51 SGHTVSAYVQDVVPVKVFIDLADVKKSSCSCPAQNMCRHVLAVYLYLYAQ    100

BSNT_05536___    101 FERVGTFTEYWLEREKLEESKELVRRQFQEKVLPNEESLSSWLAFFDSEF    150
                     ::|:|||||:|.|.:|..|::|:: .|.|..:.|...:|..|.:||::||
BL02448___ywq    101 YDRLGTFTEFWKEAQKRRENREIL-GQLQRGMKPRSHTLDQWTSFFNTEF    149

BSNT_05536___    151 SLWQARTPEGSQNMQGLYYGYLSALKKHAPNKPELKSLYQIHSAIAVWLR    200
                     ..|:..||:..|.||.|||||.|||||..|.:||||.:||||:|:|.||.
BL02448___ywq    150 RRWEEHTPKNQQTMQYLYYGYFSALKKRTPAEPELKKMYQIHAALATWLA    199

BSNT_05536___    201 MFTLIEAGKLNPEQDFYSLNPYVEQLMDTIYSSIDKLKTYALSFALDPFL    250
                     |.:|:|.|:::||:||||||||:||||||||||||:||||||||:|||||
BL02448___ywq    200 MHSLVEKGRIDPEKDFYSLNPYIEQLMDTIYSSIDELKTYALSFSLDPFL    249

BSNT_05536___    251 DKTPDVIRPLLLKEEIFQYERIRVFGEIWSALLSRPKWVAREQEILKKEA    300
                     :|||.|||.||||::||||||:|:||||||||||||.|:.||.::|.   
BL02448___ywq    250 EKTPGVIRELLLKKDIFQYERLRIFGEIWSALLSRPNWLKRELDVLN---    296

BSNT_05536___    301 GRRFSPELQFGRLHLEFLQKNDDVIFAEADQFPPEALPYTFQWLSEMTAK    350
                     ....|||:||||||||||.||||||..:|..|.||.|||||||||.||||
BL02448___ywq    297 NLEPSPEIQFGRLHLEFLLKNDDVILDQAGSFSPEILPYTFQWLSVMTAK    346

BSNT_05536___    351 KDWKRLKTWYQQIEPIAMGYTKLDKPFKEIRDVIGELFLLLNAYVQQTND    400
                     |||||||.||:.:|.:|.|:.:||||::|||||:.|.||.|:.|.:...:
BL02448___ywq    347 KDWKRLKKWYEHLEQLAAGFCRLDKPYREIRDVLSEFFLFLSDYSKNAKE    396

BSNT_05536___    401 QALFERFAAGCLPYTFTEYSHHLYEKKRYAEWIEIHSLVGLSINEMDKMM    450
                     :.:|||:...|||||||||||.||.|.|:.||:|||||||.||:|:.:..
BL02448___ywq    397 EHVFERYCKECLPYTFTEYSHFLYNKNRFTEWMEIHSLVGFSISEIGQNA    446

BSNT_05536___    451 LKEIAASDPEALIPAYHREVAFFIDQKNRSSYKEAARYLKKLRTLYKKAK    500
                     ||:|||:.||||||:||||::..::||||||||||.:.||||||||||||
BL02448___ywq    447 LKDIAAAAPEALIPSYHREISGLVEQKNRSSYKEAVKQLKKLRTLYKKAK    496

BSNT_05536___    501 KQKVWERYIQLLSSHYKRLRALQEELQKGKLIDGES    536
                     ||.||.|:::..|:.||||||.||||:|||||||||
BL02448___ywq    497 KQDVWNRFMEQFSARYKRLRAFQEELKKGKLIDGES    532


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