Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05489 and BL02444
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:38
# Commandline: needle
# -asequence pep-align/BSNT_05489___alsR.1.5803.seq
# -bsequence pep-align/BL02444___alsR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05489___alsR-BL02444___alsR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05489___alsR-BL02444___alsR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05489___alsR
# 2: BL02444___alsR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 302
# Identity: 188/302 (62.3%)
# Similarity: 231/302 (76.5%)
# Gaps: 10/302 ( 3.3%)
# Score: 993.0
#
#
#=======================================
BSNT_05489___ 1 MELRHLQYFIAVAEELHFGKAARRLNMTQPPLSQQIKQLEEEVGVTLLKR 50
||||||:||:.|||||||||||.|||||||||||||||||.|:|||||||
BL02444___als 1 MELRHLRYFMVVAEELHFGKAALRLNMTQPPLSQQIKQLESEIGVTLLKR 50
BSNT_05489___ 51 TKRFVELTAAGEIFLNHCRMALMQIGQGIELAQRTARGEQGLLVIGFVGS 100
:||.|.|||||.:||...:..|.||.|.:::||||||||.|.||||||||
BL02444___als 51 SKRAVRLTAAGGVFLKQIKEGLSQIDQAVDMAQRTARGELGRLVIGFVGS 100
BSNT_05489___ 101 ATYEFLPPIVREYRKKFPCVKIELREISSSRQQEELLKGNIDIGILHPPL 150
||||.:|||:||||.:||.|:|:|||:|:..|.:.||.|:||||:|||||
BL02444___als 101 ATYEIMPPIIREYRNRFPSVQIDLRELSTPNQIDALLNGHIDIGVLHPPL 150
BSNT_05489___ 151 QHTALHIETAQSSPCVLALPKQHPLTSKESITIEDLRDEPIITVAKEAWP 200
.:..|...|.:.|.|||||||.||||.|..:.::||.:|.:|.:||||||
BL02444___als 151 GNDELKSYTVKKSHCVLALPKHHPLTEKARVHLKDLEEESLIVIAKEAWP 200
BSNT_05489___ 201 TLYMDFIQFCEQAGFRPNIVQEATEYQMVIGLVSAGIGMTFVPSSAKKLF 250
:||.:|...||:|||.|||.||||||||||||||||:|:..||::||:||
BL02444___als 201 SLYTEFNFLCEKAGFIPNIAQEATEYQMVIGLVSAGMGIAVVPTAAKRLF 250
BSNT_05489___ 251 NLDVTYRKMDQIQLNAEWVIAYRKDNHNPLIKHFIHISNCQQTRTKESDA 300
||||.|::::...|.|||:.|:||||.||.:||||.||:...
BL02444___als 251 NLDVVYKEIEDFPLRAEWITAHRKDNRNPALKHFIEISDQHS-------- 292
BSNT_05489___ 301 GT 302
BL02444___als 292 -- 292
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