Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05481 and BL02443

See DNA alignment / Visit BSNT_05481 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:37
# Commandline: needle
#    -asequence pep-align/BSNT_05481___rbsB.1.5803.seq
#    -bsequence pep-align/BL02443___rbsB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05481___rbsB-BL02443___rbsB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05481___rbsB-BL02443___rbsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05481___rbsB
# 2: BL02443___rbsB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 305
# Identity:     231/305 (75.7%)
# Similarity:   272/305 (89.2%)
# Gaps:           1/305 ( 0.3%)
# Score: 1182.0
# 
#
#=======================================

BSNT_05481___      1 MKKAVSVILTLSLFLLTACSLEPPQWAKPSNSGNKKDFTIGLSVSTLNNP     50
                     |||.::|...|:|..|:|||||||:|||| |.....|..||||||||.||
BL02443___rbs      1 MKKTLTVFTALALLFLSACSLEPPEWAKP-NKEKGTDIKIGLSVSTLKNP     49

BSNT_05481___     51 FFVSLKKGIEKEAEKRGMKVIIVDAQNDSSKQTSDVEDLIQQGVDALLIN    100
                     ||||||.|:.|||:|:|::||:||||:||:|||:|||||:||||||||||
BL02443___rbs     50 FFVSLKNGVVKEAKKQGIEVIVVDAQDDSAKQTNDVEDLLQQGVDALLIN     99

BSNT_05481___    101 PTDSSAISTAVESANAVGVPVVTIDRSAEQGKVETLVASDNVKGGEMAAA    150
                     |.|||||||||:|||::|:||||:|||||.|||||||||||||||:|||.
BL02443___rbs    100 PADSSAISTAVQSANSLGIPVVTLDRSAENGKVETLVASDNVKGGQMAAD    149

BSNT_05481___    151 FIADKLGKGAKVAELEGVPGASATRERGSGFHNIADQKLHVVTKQSADFD    200
                     ||.::|||||||||||||||||||||||||||..||.||:|:.||:||||
BL02443___rbs    150 FIVEQLGKGAKVAELEGVPGASATRERGSGFHKTADDKLNVIAKQTADFD    199

BSNT_05481___    201 RTKGLTVMENLLQGHPDIQAVFAHNDEMALGALEAINSSGKDILVIGFDG    250
                     |||||.||||||||:|||||||||||||||||:|||.||||:|||:||||
BL02443___rbs    200 RTKGLNVMENLLQGNPDIQAVFAHNDEMALGAIEAIRSSGKEILVVGFDG    249

BSNT_05481___    251 NKDALASIKDGKLSATVAQQPELIGKLATEAADDILHGKKVQKTISAPLK    300
                     |:||:.:::.|.:|||:|||||||||||.:||.|||:||||:|||.||||
BL02443___rbs    250 NEDAVKAVQAGDMSATIAQQPELIGKLAVQAARDILNGKKVEKTIPAPLK    299

BSNT_05481___    301 LETQK    305
                     |||:|
BL02443___rbs    300 LETKK    304


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