Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05480 and BL02442
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence pep-align/BSNT_05480___rbsC.1.5803.seq
# -bsequence pep-align/BL02442___rbsC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05480___rbsC-BL02442___rbsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05480___rbsC-BL02442___rbsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05480___rbsC
# 2: BL02442___rbsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity: 275/322 (85.4%)
# Similarity: 301/322 (93.5%)
# Gaps: 2/322 ( 0.6%)
# Score: 1383.5
#
#
#=======================================
BSNT_05480___ 1 MKTEQLQTEQKRIHFDGVMQKLGPFLGLFILVIIVSILNPSFLEPLNILN 50
|||: ...:|.::.|.|||||||||||.|||:|||:|||||||||||||
BL02442___rbs 1 MKTQ--PAVKKSLNVDSVMQKLGPFLGLIILVVIVSLLNPSFLEPLNILN 48
BSNT_05480___ 51 LLRQVAINGLIAFGMTFVILTGGIDLSVGAILALSSALVAGMIVSGVDPV 100
||||||||.|||||||||||||||||||||||||||||:||||..|:|||
BL02442___rbs 49 LLRQVAINALIAFGMTFVILTGGIDLSVGAILALSSALIAGMIAGGIDPV 98
BSNT_05480___ 101 LAIILGCIIGAVLGMINGLLITKGKMAPFIATLATMTVFRGLTLVYTDGN 150
.|:|:||:|||:||::|||||||||||||||||||||:|||||:||||||
BL02442___rbs 99 FAVIIGCLIGALLGLVNGLLITKGKMAPFIATLATMTIFRGLTMVYTDGN 148
BSNT_05480___ 151 PITGLGTNYAFQMFGCGYFLGIPVPAITMVLAFVILWVLLHKTPFGRRTY 200
||||||.:|.||:||.|||||||||||||..||:||||:|||||||||||
BL02442___rbs 149 PITGLGNHYGFQLFGRGYFLGIPVPAITMAAAFIILWVILHKTPFGRRTY 198
BSNT_05480___ 201 AIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHSAQPTAG 250
||||||||||||||||.|||:|||||||||||||||||||||:|||||||
BL02442___rbs 199 AIGGNEKAALISGIKVPRVKMMIYSLAGLLSALAGAILTSRLNSAQPTAG 248
BSNT_05480___ 251 ESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSSF 300
.|||||||||||||||||:||||||.||||||||||||||||||||||||
BL02442___rbs 249 TSYELDAIAAVVLGGTSLAGGRGRIAGTLIGVLIIGTLNNGLNLLGVSSF 298
BSNT_05480___ 301 YQLVVKGIVILIAVLLDRKKSA 322
:|:||||:||||||||||||||
BL02442___rbs 299 FQMVVKGVVILIAVLLDRKKSA 320
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