Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05480 and BL02442

See DNA alignment / Visit BSNT_05480 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:37
# Commandline: needle
#    -asequence pep-align/BSNT_05480___rbsC.1.5803.seq
#    -bsequence pep-align/BL02442___rbsC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05480___rbsC-BL02442___rbsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05480___rbsC-BL02442___rbsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05480___rbsC
# 2: BL02442___rbsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity:     275/322 (85.4%)
# Similarity:   301/322 (93.5%)
# Gaps:           2/322 ( 0.6%)
# Score: 1383.5
# 
#
#=======================================

BSNT_05480___      1 MKTEQLQTEQKRIHFDGVMQKLGPFLGLFILVIIVSILNPSFLEPLNILN     50
                     |||:  ...:|.::.|.|||||||||||.|||:|||:|||||||||||||
BL02442___rbs      1 MKTQ--PAVKKSLNVDSVMQKLGPFLGLIILVVIVSLLNPSFLEPLNILN     48

BSNT_05480___     51 LLRQVAINGLIAFGMTFVILTGGIDLSVGAILALSSALVAGMIVSGVDPV    100
                     ||||||||.|||||||||||||||||||||||||||||:||||..|:|||
BL02442___rbs     49 LLRQVAINALIAFGMTFVILTGGIDLSVGAILALSSALIAGMIAGGIDPV     98

BSNT_05480___    101 LAIILGCIIGAVLGMINGLLITKGKMAPFIATLATMTVFRGLTLVYTDGN    150
                     .|:|:||:|||:||::|||||||||||||||||||||:|||||:||||||
BL02442___rbs     99 FAVIIGCLIGALLGLVNGLLITKGKMAPFIATLATMTIFRGLTMVYTDGN    148

BSNT_05480___    151 PITGLGTNYAFQMFGCGYFLGIPVPAITMVLAFVILWVLLHKTPFGRRTY    200
                     ||||||.:|.||:||.|||||||||||||..||:||||:|||||||||||
BL02442___rbs    149 PITGLGNHYGFQLFGRGYFLGIPVPAITMAAAFIILWVILHKTPFGRRTY    198

BSNT_05480___    201 AIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHSAQPTAG    250
                     ||||||||||||||||.|||:|||||||||||||||||||||:|||||||
BL02442___rbs    199 AIGGNEKAALISGIKVPRVKMMIYSLAGLLSALAGAILTSRLNSAQPTAG    248

BSNT_05480___    251 ESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSSF    300
                     .|||||||||||||||||:||||||.||||||||||||||||||||||||
BL02442___rbs    249 TSYELDAIAAVVLGGTSLAGGRGRIAGTLIGVLIIGTLNNGLNLLGVSSF    298

BSNT_05480___    301 YQLVVKGIVILIAVLLDRKKSA    322
                     :|:||||:||||||||||||||
BL02442___rbs    299 FQMVVKGVVILIAVLLDRKKSA    320


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