Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05479 and BL02441
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:37
# Commandline: needle
# -asequence pep-align/BSNT_05479___rbsA.1.5803.seq
# -bsequence pep-align/BL02441___rbsA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05479___rbsA-BL02441___rbsA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05479___rbsA-BL02441___rbsA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05479___rbsA
# 2: BL02441___rbsA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 493
# Identity: 398/493 (80.7%)
# Similarity: 446/493 (90.5%)
# Gaps: 0/493 ( 0.0%)
# Score: 2030.0
#
#
#=======================================
BSNT_05479___ 1 MQIEMKDIHKAFGKNQVLSGVSFQLLPGEVHALMGENGAGKSTLMNILTG 50
|.|:||||.||||:|||||||||:|..|||||||||||||||||||:|||
BL02441___rbs 1 MHIKMKDIFKAFGQNQVLSGVSFELQEGEVHALMGENGAGKSTLMNLLTG 50
BSNT_05479___ 51 LHKSDQGQISINGNETYFSNPKEAEQHGIAFIHQELNIWPEMTVLENLFI 100
|||.|.|.|.|:|.|||||:||||||:|||||||||||||||||||||||
BL02441___rbs 51 LHKLDSGTIEIDGKETYFSDPKEAEQNGIAFIHQELNIWPEMTVLENLFI 100
BSNT_05479___ 101 GKEISSKLGVLQTRKMKALAKEQFDKLSVSLSLDQEAGECSVGQQQMIEI 150
|:|:|||||.|..:|||||||||.::|.||:||::|||:|||||||||||
BL02441___rbs 101 GRELSSKLGFLNNKKMKALAKEQLERLGVSISLEKEAGDCSVGQQQMIEI 150
BSNT_05479___ 151 AKALMTNAEVIIMDEPTAALTEREISKLFEVITALKKNGVSIVYISHRME 200
||||||:|:||||||||||||||||.|||.||.|||||||||||||||||
BL02441___rbs 151 AKALMTDAKVIIMDEPTAALTEREIEKLFGVIRALKKNGVSIVYISHRME 200
BSNT_05479___ 201 EIFAICDRITIMRDGKTVDTTNISETDFDDVVKKMVGRELTERYPKRTPS 250
|||.||||||:|||||||||..|.:|||.:|||||||||||||||:|.|:
BL02441___rbs 201 EIFTICDRITVMRDGKTVDTKRIPDTDFHEVVKKMVGRELTERYPERQPN 250
BSNT_05479___ 251 LGDKVFEVKNASVKGSFEDVSFYVRSGEIVGVSGLMGAGRTEMMRALFGV 300
.|..|.|||.||.||.|:::||.||||||||:||||||||||:|||:||:
BL02441___rbs 251 PGRVVLEVKQASKKGVFQNISFSVRSGEIVGISGLMGAGRTELMRAVFGL 300
BSNT_05479___ 301 DRLDTGEIWIAGKKTAIKNPQEAVKKGLGFITENRKDEGLLLDTSIRENI 350
|.||:|:|:|.|||.|:|.|.:||:||:||||||||||||:|||||||||
BL02441___rbs 301 DPLDSGDIFIEGKKAALKKPSDAVQKGIGFITENRKDEGLVLDTSIRENI 350
BSNT_05479___ 351 ALPNLSSFSPKGLIDHKREAEFVDLLIKRLTIKTASPETHARHLSGGNQQ 400
|||||:||||||.||.|.|.||||||||||||||.|||||||:|||||||
BL02441___rbs 351 ALPNLASFSPKGWIDKKSEQEFVDLLIKRLTIKTESPETHARNLSGGNQQ 400
BSNT_05479___ 401 KVVIAKWIGIGLKVLILDEPTRGVDVGAKREIYTLMNELTERGVAIIMVS 450
|||||||||||.|||||||||||||||||||||.||||||:|||||:|||
BL02441___rbs 401 KVVIAKWIGIGPKVLILDEPTRGVDVGAKREIYQLMNELTDRGVAIVMVS 450
BSNT_05479___ 451 SELPEILGMSDRIIVVHEGRISGEIHAREATQERIMTLATGGR 493
||||||||||||::|:|||.:|||:...:||||||||||||||
BL02441___rbs 451 SELPEILGMSDRVLVIHEGTLSGELSRNDATQERIMTLATGGR 493
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