Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05465 and BL02436

See DNA alignment / Visit BSNT_05465 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:36
# Commandline: needle
#    -asequence pep-align/BSNT_05465___ywtF.1.5803.seq
#    -bsequence pep-align/BL02436___ywtF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05465___ywtF-BL02436___ywtF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05465___ywtF-BL02436___ywtF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05465___ywtF
# 2: BL02436___ywtF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 329
# Identity:     204/329 (62.0%)
# Similarity:   258/329 (78.4%)
# Gaps:          12/329 ( 3.6%)
# Score: 1041.0
# 
#
#=======================================

BSNT_05465___      1 MEERLQHKK-KKRRLKKWVKFTIGLFAILIIVTGSIGTYAYIKLNNASKQ     49
                        .|:.:: ||:||:||||:::...|:::..|.:.|.|||.|:.||||.
BL02436___ywt      1 ---MLRSQRTKKKRLRKWVKYSLFFIALILTATAAAGGYAYYKVANASKD     47

BSNT_05465___     50 AHIDLNENGQSVKRIKEFDPKKDSFTVLLLGIDSRNSKGETVDDARSDAN     99
                     |.:.|:...|||||||||:||||:|::||:|||:|  .|:::|..||||.
BL02436___ywt     48 AQVTLSRGEQSVKRIKEFNPKKDNFSILLMGIDAR--PGQSMDKERSDAM     95

BSNT_05465___    100 VLVTFNRKNKSATMLSIPRDSYVNIPGYGYDKFTHAHAYGGVKLSAKTIE    149
                     ||.|||||:||..:|||||||||||||.||||.||||:.||..||.:|:|
BL02436___ywt     96 VLATFNRKDKSVKLLSIPRDSYVNIPGRGYDKITHAHSLGGRDLSTETVE    145

BSNT_05465___    150 NLLDIPVDYVIESNFDAFKDVVDELNGVSINVKNEKIVNQIKKDTKGKVT    199
                     ||||||||||:|:||.|||:|||||.||.|.:|.:.||.||||||||||.
BL02436___ywt    146 NLLDIPVDYVMEANFSAFKEVVDELGGVPITIKEDYIVRQIKKDTKGKVN    195

BSNT_05465___    200 LKTGVQTLNGEEALAYVRTRKADTDFQRGQRQMEVLNAIIKKSKSLSSIP    249
                     |:||.|||.||||||||||||||||.:||:|||||:.:||.|||||:|||
BL02436___ywt    196 LQTGEQTLGGEEALAYVRTRKADTDLKRGERQMEVIKSIINKSKSLTSIP    245

BSNT_05465___    250 AYDDIVDSLGENLKMNLSLNDAIGLFPFITSLKSVDTEQLTGSDMYLYSS    299
                     |||||:|::|:|:.|||||||||||.||:||:::|||.||.|||.     
BL02436___ywt    246 AYDDILDTVGKNVSMNLSLNDAIGLIPFMTSIQTVDTLQLKGSDY-----    290

BSNT_05465___    300 RERKKLYYLKLDSEKLEEVKTELKNDIDN    328
                      :..|:||.:||.|.|.|:|.|||..:|.
BL02436___ywt    291 -QPGKVYYFQLDQENLNEIKQELKQQLDV    318


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