Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03298 and BL02435
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:59
# Commandline: needle
# -asequence pep-align/BSNT_03298___kduD.1.5803.seq
# -bsequence pep-align/BL02435___kduD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03298___kduD-BL02435___kduD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03298___kduD-BL02435___kduD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03298___kduD
# 2: BL02435___kduD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity: 187/254 (73.6%)
# Similarity: 213/254 (83.9%)
# Gaps: 0/254 ( 0.0%)
# Score: 960.0
#
#
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BSNT_03298___ 1 MGYLHDVFSLEGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSE 50
||||...||||||||||||||||||:|||:|||.||||||||||||.|.|
BL02435___kdu 1 MGYLESYFSLEGKTALVTGPGTGIGKGIAEALAKAGADIIGTSHTSGLDE 50
BSNT_03298___ 51 TQQLVEKEGRIFTSFTLDMSKPEAIKDSAADLFENRQIDILVNNAGIIHR 100
|::|:|:.||.|||:.|||...:.::..|.::.:..||||||||||.|.|
BL02435___kdu 51 TKRLIEEAGRTFTSYQLDMGNLDEVEAFAKEVPDRHQIDILVNNAGTIRR 100
BSNT_03298___ 101 EKAEDFSEENWQHVLNVNLHSLFILTQLAGRHMLKRGHGKIINIASLLSF 150
|||.|||.|||:.|:||||:|||:|||..||.|::|..||||||||||||
BL02435___kdu 101 EKAADFSRENWEAVINVNLNSLFLLTQAIGRQMIERKQGKIINIASLLSF 150
BSNT_03298___ 151 QGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPI 200
|||||||||||||||||||||||||||||..:||||||||||:|.|||.|
BL02435___kdu 151 QGGILVPAYTASKHAVAGLTKSFANEWAAYNVQVNAIAPGYIATNNTKQI 200
BSNT_03298___ 201 RDDEKRNEDILKRIPAGRWGHADDIGGTAVFLASRASDYVNGHILAVDGG 250
|||:.||.:|||||||.|||..|||.|.||||:|.||||||||:||||||
BL02435___kdu 201 RDDQNRNAEILKRIPAERWGQPDDIAGAAVFLSSPASDYVNGHVLAVDGG 250
BSNT_03298___ 251 WLSR 254
||:|
BL02435___kdu 251 WLAR 254
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