Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03298 and BL02435

See DNA alignment / Visit BSNT_03298 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:59
# Commandline: needle
#    -asequence pep-align/BSNT_03298___kduD.1.5803.seq
#    -bsequence pep-align/BL02435___kduD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03298___kduD-BL02435___kduD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03298___kduD-BL02435___kduD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03298___kduD
# 2: BL02435___kduD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 254
# Identity:     187/254 (73.6%)
# Similarity:   213/254 (83.9%)
# Gaps:           0/254 ( 0.0%)
# Score: 960.0
# 
#
#=======================================

BSNT_03298___      1 MGYLHDVFSLEGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSE     50
                     ||||...||||||||||||||||||:|||:|||.||||||||||||.|.|
BL02435___kdu      1 MGYLESYFSLEGKTALVTGPGTGIGKGIAEALAKAGADIIGTSHTSGLDE     50

BSNT_03298___     51 TQQLVEKEGRIFTSFTLDMSKPEAIKDSAADLFENRQIDILVNNAGIIHR    100
                     |::|:|:.||.|||:.|||...:.::..|.::.:..||||||||||.|.|
BL02435___kdu     51 TKRLIEEAGRTFTSYQLDMGNLDEVEAFAKEVPDRHQIDILVNNAGTIRR    100

BSNT_03298___    101 EKAEDFSEENWQHVLNVNLHSLFILTQLAGRHMLKRGHGKIINIASLLSF    150
                     |||.|||.|||:.|:||||:|||:|||..||.|::|..||||||||||||
BL02435___kdu    101 EKAADFSRENWEAVINVNLNSLFLLTQAIGRQMIERKQGKIINIASLLSF    150

BSNT_03298___    151 QGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPI    200
                     |||||||||||||||||||||||||||||..:||||||||||:|.|||.|
BL02435___kdu    151 QGGILVPAYTASKHAVAGLTKSFANEWAAYNVQVNAIAPGYIATNNTKQI    200

BSNT_03298___    201 RDDEKRNEDILKRIPAGRWGHADDIGGTAVFLASRASDYVNGHILAVDGG    250
                     |||:.||.:|||||||.|||..|||.|.||||:|.||||||||:||||||
BL02435___kdu    201 RDDQNRNAEILKRIPAERWGQPDDIAGAAVFLSSPASDYVNGHVLAVDGG    250

BSNT_03298___    251 WLSR    254
                     ||:|
BL02435___kdu    251 WLAR    254


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