Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04403 and BL02411

See DNA alignment / Visit BSNT_04403 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:34
# Commandline: needle
#    -asequence pep-align/BSNT_04403.1.5803.seq
#    -bsequence pep-align/BL02411___bioW.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04403-BL02411___bioW.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04403-BL02411___bioW.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04403
# 2: BL02411___bioW
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     135/261 (51.7%)
# Similarity:   165/261 (63.2%)
# Gaps:          51/261 (19.5%)
# Score: 723.0
# 
#
#=======================================

BSNT_04403         1 --------------MNGSHEDGGKHISGGERLIPFHEMKHTVNALLEKGL     36
                                   .||.||:|||||||||||:||..:...|:.|||||:
BL02411___bio      1 MKGEAYYSVRMRASENGPHEEGGKHISGGERLVPFIGLNDAVSDLLEKGM     50

BSNT_04403        37 SHSRGKPDFMQIQFEEVHESIKTIQPLPVYTNEVSCPGEGQKLARLLLEK     86
                     |||||:||||||||:.|:|.||.:|||.:.|||.....|||.|||.|:.:
BL02411___bio     51 SHSRGRPDFMQIQFDLVNEPIKLVQPLRIETNETVSAEEGQALARELISR    100

BSNT_04403        87 EGVSRDVIEKAYEQIPEWSDVRGAVLFDIHTGKRMDQTKEKGVRVSRMDW    136
                     .||....:|||::.|.|:..||||||||||:|:|:|..|||||||||:||
BL02411___bio    101 AGVPESAVEKAFQGIAEYWGVRGAVLFDIHSGRRIDGRKEKGVRVSRLDW    150

BSNT_04403       137 PDANFEKWALHSHVPAHSRIKEALALASKVSRHPAAIAELCWSDDPDYIT    186
                     |:|:|::||....||.:.|:|||||:||||..|||.||||||||||||||
BL02411___bio    151 PEADFQRWAALCGVPPNPRLKEALAIASKVCEHPAVIAELCWSDDPDYIT    200

BSNT_04403       187 GYVAGKKMGYQRITAMKEYGTEEG--------------------------    210
                     ||||.||:||||:|.|||:|.|.|                          
BL02411___bio    201 GYVAAKKLGYQRMTKMKEHGDESGCRIFFVDGSADVKSCIDDLEKQPVFI    250

BSNT_04403       210 -----------    210
                                
BL02411___bio    251 GQEVNHESIIR    261


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