Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04486 and BL02409
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence pep-align/BSNT_04486___menF.1.5803.seq
# -bsequence pep-align/BL02409___menF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04486___menF-BL02409___menF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04486___menF-BL02409___menF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04486___menF
# 2: BL02409___menF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity: 291/489 (59.5%)
# Similarity: 369/489 (75.5%)
# Gaps: 18/489 ( 3.7%)
# Score: 1560.0
#
#
#=======================================
BSNT_04486___ 1 MYGIKSILRIMEECLMVTTVQRTFRKEVLHALHKAKEVNHAVLISYSRQI 50
|||||||||.||...||:..|:|||||||||||:|
BL02409___men 1 ---------------MVTTVQRTFLKEAPEALNIVKKVNHAVLISYSRKI 35
BSNT_04486___ 51 ESLDPLSFFNYGAKKYTGNRFFWSDPESELTIVGLGKEAVFQTNQKNSER 100
||:|.||||..|.:::.|.|||||||:..||:||||||....|:.|::.|
BL02409___men 36 ESIDALSFFINGKEQFAGERFFWSDPDGGLTLVGLGKEISVSTDLKDAGR 85
BSNT_04486___ 101 YREVFEQWERFKKTAFHIYEEEKLQHSAVGPVLFGGFSFDPCEERGSQWD 150
|:.|.|:|||.|:..:|.:|::....:||||:|||||||||.|:|...|:
BL02409___men 86 YQAVHEKWERLKEKTYHFHEDQSRGQAAVGPLLFGGFSFDPLEDRKQHWN 135
BSNT_04486___ 151 HFSEGDFFVPALMLTMTAEGPFLTVNRWVSGGEDAEAVLEGLKAFAAEFM 200
.:.||.||:||.|||...|..|:|||||.:..||...|||.:|..|::..
BL02409___men 136 GYQEGAFFIPAAMLTQDGEETFITVNRWKTPEEDVRKVLEEIKGAASQLT 185
BSNT_04486___ 201 VPD---FKQEDQAVIAAAEELDKDDWLKAIETATSQIKEKQYDKVVLARE 247
..| :.::......|.||||..:||:|:..||..||..:|||||||||
BL02409___men 186 KADDSRYPEKGHTQYTAKEELDVPEWLEAVRRATDDIKNGKYDKVVLARE 235
BSNT_04486___ 248 LLLTFDGPIQIEPVLKTLLDDQQTSYVFAIEQEGKTFVGASPERLIKRDG 297
:|||||.|:::..||..|:.:|:|||:||||:.||:|||||||||:|:||
BL02409___men 236 ILLTFDQPVELHRVLFNLMSEQKTSYIFAIEENGKSFVGASPERLVKKDG 285
BSNT_04486___ 298 GTVMSSCLAGSIKRGVNEEDDRRIGLELLNDEKNLLEHDIVVGMIHNAFV 347
..|:|:|||||||||.:|::||.:|||||||||||:||||||.|||.|.:
BL02409___men 286 ENVLSTCLAGSIKRGESEQEDRMLGLELLNDEKNLIEHDIVVNMIHQALL 335
BSNT_04486___ 348 SSCSEVEKPDGPVLYKTKSVQHLFTPIVGQLRESASIFDLIEKLHPTPAL 397
|:||.::||..|.|||||:||||:|||||::...:|||||||||||||||
BL02409___men 336 SNCSNIKKPAKPGLYKTKNVQHLYTPIVGKMNAESSIFDLIEKLHPTPAL 385
BSNT_04486___ 398 GGAPQEKAVDVIREIEPMSRGWYAAPIGWIDSQDNGEFAVAIRSGLIEGS 447
|||||:||::||||:|||||||||||.||||...|||||||||||||:.:
BL02409___men 386 GGAPQQKAIEVIRELEPMSRGWYAAPAGWIDMSGNGEFAVAIRSGLIDSN 435
BSNT_04486___ 448 TARLFAGCGIVEDSEPISEYEETQIKLKPMISALGGERR 486
.||:|||||:|.||:|:.||||||||:|||:|||||:.|
BL02409___men 436 AARIFAGCGVVADSDPLMEYEETQIKMKPMLSALGGDIR 474
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