Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04486 and BL02409
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:41
# Commandline: needle
# -asequence dna-align/BSNT_04486___menF.1.5803.seq
# -bsequence dna-align/BL02409___menF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04486___menF-BL02409___menF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04486___menF-BL02409___menF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04486___menF
# 2: BL02409___menF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1547
# Identity: 994/1547 (64.3%)
# Similarity: 994/1547 (64.3%)
# Gaps: 208/1547 (13.4%)
# Score: 2976.5
#
#
#=======================================
BSNT_04486___ 1 GTGTATGGTATTAAAAGCATTTTAAGGATTATGGAGGAATGTCTCATGGT 50
|||||
BL02409___men 1 ---------------------------------------------ATGGT 5
BSNT_04486___ 51 GACAACGGTGCAGCGTACGTTCCGAAAGGAAGTTCTACATGCATTACATA 100
||||||.||||||||.||.||||..|||||||..|...|.||||||.|.|
BL02409___men 6 GACAACAGTGCAGCGCACTTTCCTCAAGGAAGCGCCTGAAGCATTAAACA 55
BSNT_04486___ 101 AAGCCAAAGAAGTCAACCATGCTGTCTTAATAAGCTATTCGAGACAAATC 150
..|.||||.||||||||||||||||.||||||||||||||.|||.||||.
BL02409___men 56 TCGTCAAAAAAGTCAACCATGCTGTTTTAATAAGCTATTCCAGAAAAATT 105
BSNT_04486___ 151 GAGTCTCTTGACCCTCTATCATTTTTCAATTACGGAGCAA-AAAAATATA 199
|||....|.||..||||.||.|||||||...|||| |.|| ||.|||.|.
BL02409___men 106 GAGAGCATAGATGCTCTTTCCTTTTTCATAAACGG-GAAAGAACAATTTG 154
BSNT_04486___ 200 CAGGCAATCGATTTTTTTGGTCAGATCCTGAAAGTGAATTGACAATAGTC 249
|.||..|.||.||.||.|||||.|||||.||..|.|...||||..|.|||
BL02409___men 155 CCGGGGAACGGTTCTTCTGGTCTGATCCGGACGGCGGGCTGACGCTTGTC 204
BSNT_04486___ 250 GGTCTTGGCAAAGA---AGCGGTTTTCCAGACAAATCAAAAAAACAGCGA 296
||.||.||.||.|| |.||||||.| |||.|||..||..|...||.
BL02409___men 205 GGGCTGGGAAAGGAAATATCGGTTTCC---ACAGATCTGAAGGATGCCGG 251
BSNT_04486___ 297 GCGGTATCGTGAGGTTTT---TGAACAATGGGAGCGCTTTAAAAAGACGG 343
.||.|||| |||.|.| ||||.|||||||||||||.|||.|||...
BL02409___men 252 ACGTTATC---AGGCTGTACATGAAAAATGGGAGCGCTTAAAAGAGAAAA 298
BSNT_04486___ 344 CTTTTCATATTTATGAAGAAGAAAAGCTGCAG----CATTCTGCAGTGGG 389
|.|.|||..||.|||||||..||| |||| ||..|.||.|||||
BL02409___men 299 CCTATCACTTTCATGAAGATCAAA----GCAGAGGTCAGGCAGCGGTGGG 344
BSNT_04486___ 390 ACCTGTGTTATTCGGAGGATTTTCTTTTGACCCTTGC--GAAGA----AA 433
.||..||.|.||.||.||.|||||.|||||.|| || ||||| ||
BL02409___men 345 GCCATTGCTGTTTGGCGGTTTTTCATTTGATCC--GCTGGAAGATCGCAA 392
BSNT_04486___ 434 GAGGTTCA-CAATGGGACCATTTCTCGGAAGGGGATTTCTTTGTGCCTG- 481
| || ||.|||.||...|.|..||||||.|.|||.|||.|.||.|
BL02409___men 393 G-----CAGCATTGGAACGGCTACCAGGAAGGCGCTTTTTTTATTCCCGC 437
BSNT_04486___ 482 CGCTTATGCTGAC-GATGACTGCTGAAGGCCCGTTCTTAACAGTTAACAG 530
||| ||||||||| .|.||| |..||.|...|.|||.||||.||.||.||
BL02409___men 438 CGC-TATGCTGACACAGGAC-GGAGAGGAAACATTCATAACGGTCAATAG 485
BSNT_04486___ 531 ATGGGTAAG----CGGAGGAGAAGA----CGCAGAAGCTGTTTTAGAA-- 570
|||| ||| |.|| |||||| |||| |||...||..||||
BL02409___men 486 ATGG--AAGACTCCTGA--AGAAGACGTGCGCA-AAGTACTTGAAGAAAT 530
BSNT_04486___ 571 ---------GGCTTAAAAGCTTTTG----CGGCGGAATTTATGGTTCCTG 607
.||||.|.||| || .||||| |.|.||||.|
BL02409___men 531 AAAGGGCGCTGCTTCACAGC---TGACCAAGGCGG-----ACGATTCCCG 572
BSNT_04486___ 608 ATTTCAAGCAAGAAGATCAGGCTGTGATTGCA----GCAGCC---GAAGA 650
.|.|| .|.||.|||.|||..| ||| .|.||| |||||
BL02409___men 573 TTATC-CGGAAAAAGGTCATAC-------GCAATATACCGCCAAGGAAGA 614
BSNT_04486___ 651 GCTGGATAAGGATGATTGGCTGAAAGCAATCGAAAC----GGCCACAAGC 696
|||.|||.....|||.|||||..||||..|| | |||.|||..|
BL02409___men 615 GCTTGATGTTCCTGAATGGCTTGAAGCGGTC----CGGCGGGCGACAGAC 660
BSNT_04486___ 697 CAAATTAAAGAGAAAC----AATATGATAAGGTTGTTCTTGCCCGAGAGC 742
.|.||||| |||| |.||.|||||.||.||.||.|||.|||||.
BL02409___men 661 GACATTAA----AAACGGGAAGTACGATAAAGTCGTGCTCGCCAGAGAGA 706
BSNT_04486___ 743 TGCTGCTCACGTTTGA-----CGGTCCAA-TCCAAATTGAACCGGTGCTT 786
|.||..|.|||||.|| |.|||.|| |.||.|..|.| |..||
BL02409___men 707 TCCTTTTAACGTTCGATCAGCCTGTCGAACTTCACAGAGTA----TTATT 752
BSNT_04486___ 787 AAAACGCTTCTG--GAC-GATCAGCAGACAAGCTATGTTTTTGCAATTGA 833
.|| |||| |.| ||.||..|.||.||||||.|.||.||.|||||
BL02409___men 753 CAA-----TCTGATGTCTGAACAAAAAACGAGCTATATATTCGCCATTGA 797
BSNT_04486___ 834 ACAAGAAGGCAAAACCTTTGTCGGCGCGTCTCCGGAAAGACTGATCAAAA 883
|.||.|.|||||||..|||||.|||||||||||||||.|.||..||||||
BL02409___men 798 AGAAAACGGCAAAAGTTTTGTGGGCGCGTCTCCGGAACGTCTTGTCAAAA 847
BSNT_04486___ 884 GAGACGGCG-GCACTGTCATGTCTTCCTGTCTGGCAGGCTCCATTAAACG 932
.||||||.| |.|| ||..||||..||||.||.||.||.||.||.||..|
BL02409___men 848 AAGACGGAGAGAAC-GTTCTGTCGACCTGCCTCGCCGGTTCAATCAAGAG 896
BSNT_04486___ 933 AGGCGTGAATGAAGAAGACGACCGCCGGATAGGCCTTGAATTATTAAACG 982
|||||..|.|||..|.||.|||||...|.|.||.|||||..|.|||||||
BL02409___men 897 AGGCGAAAGTGAGCAGGAAGACCGGATGCTCGGTCTTGAGCTGTTAAACG 946
BSNT_04486___ 983 ATGAGAAAAACCTGCTTGAGCATGATATTGTGGTAGGTATGATTCATAA- 1031
||||.|||||.||..|.||.|||||.|||||.||...||||||||||.|
BL02409___men 947 ATGAAAAAAATCTAATCGAACATGACATTGTCGTCAATATGATTCATCAG 996
BSNT_04486___ 1032 -TGCTTTTGTATCAAGCTGTTCAG--AGGTTGAAAAGCCTG------ATG 1072
.||||||| ||||..|| ||| |..|..|||||||.| ..|
BL02409___men 997 GCGCTTTTG--TCAAATTG--CAGCAATATCAAAAAGCCGGCCAAGCCGG 1042
BSNT_04486___ 1073 GACCTGTTTTGTACAAAACAAAAAGCGTTCAGCACCTGTTTACGCCGATT 1122
||| |.|||||||||||||..||.|||||..|||.||||||||||
BL02409___men 1043 GAC------TTTACAAAACAAAAAATGTGCAGCATTTGTATACGCCGATT 1086
BSNT_04486___ 1123 GTCGGACA-----GCTGCGCGAGTCTGCTTCAATTTTTGACTTAATTGAG 1167
||||| || ..|||| |||| |.||.||||||||.|||||.|||
BL02409___men 1087 GTCGG-CAAAATGAATGCG-GAGT---CCTCGATTTTTGATTTAATCGAG 1131
BSNT_04486___ 1168 AAGCTGCATCCCACTCCGGCGCTCGGGGGAGCACCTCAGGAAAAAGCTGT 1217
|||||.||.||.|||||.||||||||.||||||||.|||.|||||||..|
BL02409___men 1132 AAGCTTCACCCAACTCCTGCGCTCGGAGGAGCACCACAGCAAAAAGCGAT 1181
BSNT_04486___ 1218 TGACGTGATCAGGGAGATTGAACCGATGTCTCGCGGCTGGTATGCTGCCC 1267
|||.||.|||||||||.|.|||||||||||..|.|||||||||||.||.|
BL02409___men 1182 TGAGGTTATCAGGGAGTTGGAACCGATGTCAAGGGGCTGGTATGCGGCAC 1231
BSNT_04486___ 1268 CTATCGGCTGGATTGACA-GCCAGGATAACGGGGAATTCGCGGTAGCCAT 1316
|....||||||||.|||| |.|.|| .||.||||||||||||||.||.||
BL02409___men 1232 CGGCGGGCTGGATCGACATGTCCGG-CAATGGGGAATTCGCGGTGGCGAT 1280
BSNT_04486___ 1317 TCGTTCAGGGCTGATCGAAGGAAGCACTGCAAGGCTGTTTGCCGGGTGCG 1366
..|.||.||.||.|||||...||...|.||.||..|.||.|||||.||||
BL02409___men 1281 CAGGTCGGGACTTATCGATTCAAATGCGGCCAGAATTTTCGCCGGCTGCG 1330
BSNT_04486___ 1367 GTATTGTGGAAGACTCGGAACCAATCT--CGGAATATGAAGAAACACAGA 1414
|..||||||..||.||.||.|| ||| .||||||.|||||||||||.|
BL02409___men 1331 GGGTTGTGGCTGATTCCGATCC--TCTTATGGAATACGAAGAAACACAAA 1378
BSNT_04486___ 1415 TTAAATTGAAGCCGATGATCTCTGCATTAGGAGGTGAGAGGCGTTGA 1461
||||..|||||||||||.|.|||||..|.|||||.||.|..||||||
BL02409___men 1379 TTAAGATGAAGCCGATGCTGTCTGCTCTTGGAGGCGATATCCGTTGA 1425
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