Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04483 and BL02407

See DNA alignment / Visit BSNT_04483 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_04483___ytxM.1.5803.seq
#    -bsequence pep-align/BL02407___ytxM.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04483___ytxM-BL02407___ytxM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04483___ytxM-BL02407___ytxM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04483___ytxM
# 2: BL02407___ytxM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     138/274 (50.4%)
# Similarity:   189/274 (69.0%)
# Gaps:           4/274 ( 1.5%)
# Score: 724.0
# 
#
#=======================================

BSNT_04483___      1 MGTVNITVSDGIRYAVADEGPNASEAVVCLHGFTGSKQSWTFLDEMLSDS     50
                        :.:|:.||:.|.:.|.|.:|.:..|.|||||||..:|..:|......
BL02407___ytx      1 ---MKLTLKDGVSYKIEDNGLSAEKTAVFLHGFTGSAATWDGIDGYFQGM     47

BSNT_04483___     51 RLIKIDCLGHGETDAPLNGKRYSTSRQVSDLAEILNQLKLHKVKLIGYSM    100
                     ||||::.||||.||:|.:.:||:|.:|.:||.||.::|.:.:..||||||
BL02407___ytx     48 RLIKLNLLGHGGTDSPSDSRRYTTEKQAADLIEIFDRLNVKQAYLIGYSM     97

BSNT_04483___    101 GGRLAYSFAMTYPERVSALVLESTTPGLKTLGERRERIMRDRKLADFILR    150
                     |||||.|.||.:|||||.|||||::|||.:..||:.|..:|.:|:..||.
BL02407___ytx     98 GGRLALSLAMIHPERVSGLVLESSSPGLDSPEERKARREQDSRLSRRILE    147

BSNT_04483___    151 DGLKAFVAYWENIPLFSSQQRLAEDIRHRIRSGRLRNNKIGLANSLTGMG    200
                     :|:|:||.|||.||||:||..:....|.::|..||.||.|||..||.|||
BL02407___ytx    148 EGIKSFVDYWEGIPLFASQLSMDPSKRKKVREERLNNNPIGLRGSLIGMG    197

BSNT_04483___    201 TGSQPSFWSRVEEIDVPVLLICGEWDEKFCAINQEVHKMLPSSRIEIVPK    250
                     ||||||:|:::..|:.|||||.|..|:||.|||:.:.|.:|::|:|||..
BL02407___ytx    198 TGSQPSWWNKLSGINYPVLLIAGSLDQKFVAINESMAKRIPAARLEIVEH    247

BSNT_04483___    251 AGHTVHVEQPRLFGKIVSEFLTSI    274
                     .||.||||:|..||:|||||:.. 
BL02407___ytx    248 TGHAVHVEEPDFFGRIVSEFILK-    270


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