Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04468 and E2

See DNA alignment / Visit BSNT_04468 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:39
# Commandline: needle
#    -asequence pep-align/BSNT_04468___rpmE2.1.5803.seq
#    -bsequence pep-align/BL02403___rpmE2.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04468___rpmE2-BL02403___rpmE2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04468___rpmE2-BL02403___rpmE2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04468___rpmE2
# 2: BL02403___rpmE2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 82
# Identity:      70/82 (85.4%)
# Similarity:    75/82 (91.5%)
# Gaps:           1/82 ( 1.2%)
# Score: 379.0
# 
#
#=======================================

BSNT_04468___      1 MKEGIHPKNHKVIFQDVNSGYRFLSTSTKTSNETAEWEDGNTYPVIKVEV     50
                     ||..||||.::||||||||||||||.|||||:||||||||.|||||||||
BL02403___rpm      1 MKPNIHPKTYQVIFQDVNSGYRFLSRSTKTSDETAEWEDGKTYPVIKVEV     50

BSNT_04468___     51 SSDTHPFYTGRQKFNEKGGRVEQFKKRYNMGK     82
                     ||||||||||||||||:||||||||||:||. 
BL02403___rpm     51 SSDTHPFYTGRQKFNERGGRVEQFKKRFNMD-     81


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