Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03936 and BL02398
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence pep-align/BSNT_03936.1.5803.seq
# -bsequence pep-align/BL02398___cypE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03936-BL02398___cypE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03936-BL02398___cypE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03936
# 2: BL02398___cypE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1075
# Identity: 458/1075 (42.6%)
# Similarity: 565/1075 (52.6%)
# Gaps: 321/1075 (29.9%)
# Score: 2411.5
#
#
#=======================================
BSNT_03936 0 -------------------------------------------------- 0
BL02398___cyp 1 MNKLDGIPIPKTYGPLGNLPLLDKNRVSQSLWKIADEMGPIFQFKFADAI 50
BSNT_03936 0 -------------------------------------------------- 0
BL02398___cyp 51 GVFVSSHELVKEVSEESRFDKNMGKGLLKVREFSGDGLFTSWTEEPNWRK 100
BSNT_03936 0 -------------------------------------------------- 0
BL02398___cyp 101 AHNILLPSFSQKAMKGYHPMMQDIAVQLIQKWSRLNQDESIDVPDDMTRL 150
BSNT_03936 0 -------------------------------------------------- 0
BL02398___cyp 151 TLDTIGLCGFNYRFNSFYREGQHPFIESMVRGLSEAMRQTKRFPLQDKLM 200
BSNT_03936 0 -------------------------------------------------- 0
BL02398___cyp 201 IQTKRRFNSDVESMFSLVDRIIADRKQAESESGNDLLSLMLHAKDPETGE 250
BSNT_03936 1 -------------------------------------------------M 1
:
BL02398___cyp 251 KLDDENIRYQIITFLIAGHETTSGLLSFAIYLLLKHPDKLKKAYEEADRV 300
BSNT_03936 2 LTDDTPEYKQIQQLKYTRMVLNETLRLYPTAPAFSLYAKEDTVLGGEYPI 51
|||..|.|||:|||||.||:|||::||:||||||||||||:||:||:|.|
BL02398___cyp 301 LTDPVPSYKQVQQLKYIRMILNESIRLWPTAPAFSLYAKEETVIGGKYLI 350
BSNT_03936 52 SKGQPVTVLIPKLHRDQNAWGPDAEDFRPERFEDPSSIPHHAYKPFGNGQ 101
.|||.||||||||||||:.||.|||.|||||||...|||.||||||||||
BL02398___cyp 351 PKGQSVTVLIPKLHRDQSVWGEDAEAFRPERFEQMDSIPAHAYKPFGNGQ 400
BSNT_03936 102 RACIGMQFALQEATMVLGLVLKHFELINHTGYELKIKEALTIKPDDFKIT 151
||||||||||.|||:|||::|::|:|.:|..|:|||||:||:|||.|.|.
BL02398___cyp 401 RACIGMQFALHEATLVLGMILQYFDLEDHANYQLKIKESLTLKPDGFTIR 450
BSNT_03936 152 VKPRKTAAINVQRKEQAEIKAETKPKETKP----KHGTPLLVLYGSNLGT 197
|:|||..|:......|.|.....:.:.:.| .|||||||||||||||
BL02398___cyp 451 VRPRKKEAMTAMPGAQPEENGRQEERPSAPAAENTHGTPLLVLYGSNLGT 500
BSNT_03936 198 AEGIADELASQGRQMGFTAETAPLDDYIGKLPEEGAVVIVTASYNGSPPD 247
||.||.|||.:.|:.||.:.||.||.|.|.:|.||||:||||||||:|||
BL02398___cyp 501 AEEIAKELAEEAREQGFHSRTAELDQYAGAIPAEGAVIIVTASYNGNPPD 550
BSNT_03936 248 NAAGFVEWLKELEEGQLKGVSYAVFGCGNRSWASTYQRIPRLIDDMMKAK 297
.|..||.||:..:...|:||.|||||||||||||||||||||||.:::.|
BL02398___cyp 551 CAKEFVNWLEHDQTDDLRGVKYAVFGCGNRSWASTYQRIPRLIDSVLEKK 600
BSNT_03936 298 GASRLTEIGEGDAADDFESHRESWENRFWKETMDAFDINEIAQKE---DR 344
||.||.::|||||.||||...|||:...|......|.:.|....: ||
BL02398___cyp 601 GAQRLHKLGEGDAGDDFEGQFESWKYDLWPLLRTEFSLAEPEPNQTETDR 650
BSNT_03936 345 PSLSIAFLSEATETPVAKAYGAFEGVVLENRELQTADSTRSTCHIELEIP 394
.:||:.|::....:|:||||..|...:..|||||...|.|||.|||:.:|
BL02398___cyp 651 QALSVEFVNAPAASPLAKAYQVFTAKISANRELQCEKSGRSTRHIEISLP 700
BSNT_03936 395 AGKTYKEGDHIGILPKNSRELVQRVLSRFGLQSNHVIKVSGSAHMAHLPM 444
.|..|:||||:|:||:||..|:.||..||||..|..|.:||....:|||:
BL02398___cyp 701 EGAAYQEGDHLGVLPQNSEVLIGRVFQRFGLNGNEQILISGRNQASHLPL 750
BSNT_03936 445 DRPIKVADLLSSYVELQEPASRLQLRELASYTVCPPHQKELEQLVSDDGI 494
:||:.|.||....|||||||:|.|:||||::|||||||:|||.|:.|| :
BL02398___cyp 751 ERPVHVKDLFQHCVELQEPATRAQIRELAAHTVCPPHQRELEDLLKDD-V 799
BSNT_03936 495 YKEQVLAKRLTMLDFLEDYPACEMPFERFLALLPSLKPRYYSISSSPKVH 544
||:|||.|||||||.||.|||||:||.|||||||.||||||||||||:::
BL02398___cyp 800 YKDQVLNKRLTMLDLLEQYPACELPFARFLALLPPLKPRYYSISSSPQLN 849
BSNT_03936 545 ANIVSMTVGVVKASAWSGRGEYRGVASNYLAELNTGDAAACFIRTPQSGF 594
....|:||.||...|.||||.|:||||||||.|..|||.:||||.|||||
BL02398___cyp 850 PRQTSITVSVVSGPALSGRGHYKGVASNYLAGLEPGDAISCFIREPQSGF 899
BSNT_03936 595 QMPDEPETPMIMVGPGTGIAPFRGFIQARSVLKKEGSTLGEALLYFGCRR 644
::|::||||:|||||||||||:|||:|||.:.:..|..||||.|||||||
BL02398___cyp 900 RLPEDPETPVIMVGPGTGIAPYRGFLQARRIQRDAGVKLGEAHLYFGCRR 949
BSNT_03936 645 PDHDDLYREELDQAEQEGLVTIRRCYSRVKNEPKEYVQHLLKQDTQKLMT 694
|:.|.|||:||:|||::|:|.:...:||::..||.|||.||::|...|:.
BL02398___cyp 950 PNEDFLYRDELEQAEKDGIVHLHTAFSRLEGRPKTYVQDLLREDAALLIH 999
BSNT_03936 695 LIEKGAHIYVCGDGSQMAPDVEKTLRLAYEAEKGASQEESAEWLQKLQDQ 744
|:.:|..:|||||||:|||.||:.|..||...:|||:|||..||..|.::
BL02398___cyp 1000 LLNEGGRLYVCGDGSRMAPAVEQALCEAYRIVQGASREESQSWLSALLEE 1049
BSNT_03936 745 RRYVKDVWTGM-------------- 755
.||.||||.|.
BL02398___cyp 1050 GRYAKDVWDGGVSQHNVKADCIART 1074
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