Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03938 and BL02397
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:57
# Commandline: needle
# -asequence pep-align/BSNT_03938___yrhI.1.5803.seq
# -bsequence pep-align/BL02397.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03938___yrhI-BL02397.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03938___yrhI-BL02397.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03938___yrhI
# 2: BL02397
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 93/194 (47.9%)
# Similarity: 136/194 (70.1%)
# Gaps: 13/194 ( 6.7%)
# Score: 501.5
#
#
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BSNT_03938___ 1 --------MIMKASVSLFTERGFDATTIPMIAERAHVGTGTIYRYFDSKE 42
.|::||:.||.:|||||.||||||::|:||.|||||||||||
BL02397 1 MESESKYQKIIEASLVLFADRGFDAATIPMIADKANVGAGTIYRYFDSKE 50
BSNT_03938___ 43 TLVNVLFQESIQRFTEKLKQDVSE--LPVREGFHHVFCCLVQFTKESDYA 90
.|||||||:|::||.||:::...| ..:::.|.|:|.||.:|::|:.:|
BL02397 51 ALVNVLFQDSVKRFKEKIEEGYPEDSAGIKKQFQHIFRCLFEFSQENIHA 100
BSNT_03938___ 91 LFFLETKKDAHYLNHTSKKMIENLTQMLDDYFNKGKAEGVIRSLPSNVLI 140
|:|||..|.:|||...|::::..|...:..:|.||||.|:||.|||::|.
BL02397 101 LYFLEIDKTSHYLTEKSREVLNELLDFIYLFFEKGKAAGMIRPLPSHILS 150
BSNT_03938___ 141 AIVLGAFLKIYQLVQTGDIEMDTDLITELEQCCWDAIKLHSSQK 184
|:|.|||:.|.:||:.|:.|..|:|:.|:|:|.|||:|.|.
BL02397 151 AVVFGAFVHIQKLVRAGEFEDPTELMEEIEECSWDAVKHHG--- 191
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