Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06180 and BL02380

See DNA alignment / Visit BSNT_06180 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:08
# Commandline: needle
#    -asequence pep-align/BSNT_06180___yycN.1.5803.seq
#    -bsequence pep-align/BL02380___yycN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06180___yycN-BL02380___yycN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06180___yycN-BL02380___yycN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06180___yycN
# 2: BL02380___yycN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 173
# Identity:      84/173 (48.6%)
# Similarity:   117/173 (67.6%)
# Gaps:          17/173 ( 9.8%)
# Score: 480.0
# 
#
#=======================================

BSNT_06180___      1 -----------------MTIMLTPMQSEEFRSYLTYTTKHYAEEKVKAGT     33
                                      ..|.||||..|:|:.|.||:.:|||.|||||||
BL02380___yyc      1 MMLKSKIKIDLNKPRKKPEIRLTPMTEEDFKIYQTYSIQHYAMEKVKAGT     50

BSNT_06180___     34 WLPEDAQLLSKQAFTDLLPRGLETPHHHLWSLKLNEKDTVGWLWIHAEPE     83
                     |...:|...:::.|..|||.|:||.:|:|||:..:..:..||:||:|:|.
BL02380___yyc     51 WTVAEAMEKAEEQFAALLPNGIETINHYLWSIMNDSGNAAGWVWIYADPH    100

BSNT_06180___     84 HPQQEAFIYDFGLYEPYRGKGYAKQALAALDHTARSMGIRKLSLHVFAHN    133
                     |||:|||||||||||.|||:|..:||||.|:..|:.:|::||||||||||
BL02380___yyc    101 HPQKEAFIYDFGLYEAYRGQGIGQQALAVLEEEAKQLGVKKLSLHVFAHN    150

BSNT_06180___    134 QTARKLYEQTGFQETDVVMSKKI    156
                     :.|::|||:..|:.||:.|||::
BL02380___yyc    151 KKAKRLYEKMNFETTDLHMSKRL    173


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