Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_06197 and BL02374

See DNA alignment / Visit BSNT_06197 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:10
# Commandline: needle
#    -asequence pep-align/BSNT_06197___yycI.1.5803.seq
#    -bsequence pep-align/BL02374___yycI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06197___yycI-BL02374___yycI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06197___yycI-BL02374___yycI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06197___yycI
# 2: BL02374___yycI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 289
# Identity:     136/289 (47.1%)
# Similarity:   202/289 (69.9%)
# Gaps:          16/289 ( 5.5%)
# Score: 690.0
# 
#
#=======================================

BSNT_06197___      1 MEWNKTKSIFIVAFLILDIFLGYQFFQKWQATGKEYEVI-KNDVEHDMKA     49
                     ||||:||:|||:.||||||||.:|:|.|  .:..::.:: |:.::.||||
BL02374___yyc      1 MEWNRTKTIFIIVFLILDIFLAFQYFNK--RSNNQFPILEKSTLQEDMKA     48

BSNT_06197___     50 DHITYEGLNKEATEGYRITANQKSFSKEEIEALKDQKP--LMDMPSDDHK     97
                     |||:|..|:||.::|..|:|.::.|.:.||::||.|||  ||: .:.::.
BL02374___yyc     49 DHISYGNLSKETSKGSSISAQKRVFKQSEIKSLKGQKPKALMN-TAKENA     97

BSNT_06197___     98 VTSLKMKFANPIALSKKDIEDDAQALVSSKIQDGEKYKLWKVDKSKKEII    147
                     :|.::|:|..||||.|.|::..|:.:|:.:|.||.||||||||||.|:|:
BL02374___yyc     98 LTEIEMEFETPIALPKTDMKTKAREIVNEEIIDGNKYKLWKVDKSGKQIV    147

BSNT_06197___    148 FFQTYEGHYIYQKTDN-PSNMIGQVVLHLNGKNEVVSYDQTTLETFKQIQ    196
                     |||||.|:||:|...| .:|.:|:|||:||.|||||||.|:.|:..|:::
BL02374___yyc    148 FFQTYNGNYIFQDRQNDDNNEMGEVVLYLNNKNEVVSYKQSMLQDIKEVK    197

BSNT_06197___    197 KESLITEMDAVELLYYQNQLKEYSTVKSCKFGYVAQYPLTSTQVLAPVWR    246
                     .|:||:.:.|||.|||.:.||:||.:||.:.||..||||.|.|:..||||
BL02374___yyc    198 TENLISAVGAVEALYYPDYLKKYSKIKSAELGYFTQYPLASAQIFVPVWR    247

BSNT_06197___    247 ITVEYDKKVNGEKKTVQEYFTVNALESTILDTDQ-----    280
                     |.||  :|.  :.||:.|.|.|:|.:..:|.:.:     
BL02374___yyc    248 IEVE--RKT--DDKTIHEEFIVDARDGALLQSQEKKEKS    282


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