Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00039 and BL02357

See DNA alignment / Visit BSNT_00039 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:41
# Commandline: needle
#    -asequence pep-align/BSNT_00039___dnaX.1.5803.seq
#    -bsequence pep-align/BL02357___dnaX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00039___dnaX-BL02357___dnaX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00039___dnaX-BL02357___dnaX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00039___dnaX
# 2: BL02357___dnaX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 566
# Identity:     478/566 (84.5%)
# Similarity:   517/566 (91.3%)
# Gaps:           3/566 ( 0.5%)
# Score: 2429.5
# 
#
#=======================================

BSNT_00039___      1 MSYQALYRVFRPQRFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTG     50
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BL02357___dna      1 MSYQALYRVFRPQLFEDVVGQEHITKTLQNALLQKKFSHAYLFSGPRGTG     50

BSNT_00039___     51 KTSAAKIFAKAVNCEHAPVDEPCNECAACKGITNGSISDVIEIDAASNNG    100
                     ||||||:||||||||.|||.||||||:|||||||||||||||||||||||
BL02357___dna     51 KTSAAKLFAKAVNCERAPVSEPCNECSACKGITNGSISDVIEIDAASNNG    100

BSNT_00039___    101 VDEIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BL02357___dna    101 VDEIRDIRDKVKFAPSAVTYKVYIIDEVHMLSIGAFNALLKTLEEPPEHC    150

BSNT_00039___    151 IFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGRMNKIVDAEQLQVEE    200
                     |||||||||||||||||||||||||||||||||||||.|||:||||:|::
BL02357___dna    151 IFILATTEPHKIPLTIISRCQRFDFKRITSQAIVGRMKKIVEAEQLKVQD    200

BSNT_00039___    201 GSLDIIASAADGGMRDALSLLDQAISFSGDILKVEDALLITGAVSQLYIG    250
                     |:||||||||||||||||||||||:||||:.|.|:|||||||||||.|||
BL02357___dna    201 GALDIIASAADGGMRDALSLLDQAVSFSGEELTVDDALLITGAVSQHYIG    250

BSNT_00039___    251 KLAQSLHDKNVSDALETLNELLQQGKDPAKLIEDMIFYFRDMLLYKTAPG    300
                     |||.:||:||||.||||||||||||||||||||||||||||||||:|||.
BL02357___dna    251 KLASTLHEKNVSGALETLNELLQQGKDPAKLIEDMIFYFRDMLLYQTAPD    300

BSNT_00039___    301 LEGVLEKVKVDETFRKLSEQIPAQALYEMIDILNKSHQEMKWTNHPRIFF    350
                     ||||||||||||.|:.||.||||..|||||||||||||||||||||||||
BL02357___dna    301 LEGVLEKVKVDEEFQTLSRQIPASDLYEMIDILNKSHQEMKWTNHPRIFF    350

BSNT_00039___    351 EVAVVKICQ--TSHQSAADLPEVDMLMKKIQQLEQEVERLKTTGIK-AAA    397
                     ||||||:||  .:..|||..||||.|:.|::|||||:|||||.|:: ::|
BL02357___dna    351 EVAVVKLCQGPKAGASAAAQPEVDNLVNKVRQLEQEIERLKTQGVQVSSA    400

BSNT_00039___    398 ESPKKEAPRVPKGGKSNYKAPVGRIHEILKEATRPDLDLLRNSWGKLLAH    447
                     .:..|||.|..|..||.|||||||||||||:||||||:.|:..||:|||.
BL02357___dna    401 PAQAKEASRPQKSIKSAYKAPVGRIHEILKDATRPDLEKLKGCWGQLLAQ    450

BSNT_00039___    448 LKQQNKVSHAALLNDSEPVAAGSAAFVLKFKYEIHCKMVAEDNNGVRTNL    497
                     |||||||||||||||||||||.|.||||.|||||||||||||||||||||
BL02357___dna    451 LKQQNKVSHAALLNDSEPVAASSKAFVLAFKYEIHCKMVAEDNNGVRTNL    500

BSNT_00039___    498 EQILESMLGKRMDLIGVPEAQWGKIREEFLEDHQQENEGSNEPAEEDPLI    547
                     ||||:.|||.|:|::|||||||||||||||:|||.|:..:|||.|||||:
BL02357___dna    501 EQILDGMLGGRIDIVGVPEAQWGKIREEFLQDHQPEDSEANEPKEEDPLV    550

BSNT_00039___    548 AEAKKLVGADLIEIKD    563
                     ||||||.||:|||||:
BL02357___dna    551 AEAKKLFGAELIEIKE    566


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