Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00036 and BL02356
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:41
# Commandline: needle
# -asequence pep-align/BSNT_00036___yaaJ.1.5803.seq
# -bsequence pep-align/BL02356___yaaJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00036___yaaJ-BL02356___yaaJ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00036___yaaJ-BL02356___yaaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00036___yaaJ
# 2: BL02356___yaaJ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 198
# Identity: 133/198 (67.2%)
# Similarity: 147/198 (74.2%)
# Gaps: 39/198 (19.7%)
# Score: 686.5
#
#
#=======================================
BSNT_00036___ 1 ------------------------------------MTQDELYMKEAIKE 14
|||||.|||||:.|
BL02356___yaa 1 MRAELDNAIVSFQILYSFNYKLAYSVWRKTLKECMRMTQDEFYMKEAVNE 50
BSNT_00036___ 15 AKKAEEKGEVPIGAVLVVNDEIIARAHNLRETEQRSIAHAEMLVIDEACK 64
|:|||||||||||||||::.||||||||||||||||:||||||||:|||:
BL02356___yaa 51 ARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIEEACR 100
BSNT_00036___ 65 ALGTWRLEGATLYVTLEPCPMCAGAVVLSRVEKVVFGAFDPKGGCSGTLM 114
.|||||||.|.||||||||||||||.||||::||||||.||||||:||||
BL02356___yaa 101 KLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLM 150
BSNT_00036___ 115 NLLQEERFNHQAEVVSGVLEEECGGMLSAFFRELRKKKKAARKNLSE- 161
||||||||||||||||||:|||||.|||.|||:||.||||.:: ||
BL02356___yaa 151 NLLQEERFNHQAEVVSGVMEEECGRMLSDFFRKLRAKKKAEKQ--SEL 196
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