Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01256 and BL02344
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:45
# Commandline: needle
# -asequence pep-align/BSNT_01256___yfmR.1.5803.seq
# -bsequence pep-align/BL02344___yfmR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01256___yfmR-BL02344___yfmR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01256___yfmR-BL02344___yfmR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01256___yfmR
# 2: BL02344___yfmR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 634
# Identity: 500/634 (78.9%)
# Similarity: 558/634 (88.0%)
# Gaps: 10/634 ( 1.6%)
# Score: 2557.0
#
#
#=======================================
BSNT_01256___ 1 MSILKAENLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSTLLKVIA 50
|||.|||.|||||||||||||||||||||||||||||||||||:||||||
BL02344___yfm 1 MSIFKAEGLYKTYGDKTLFDHISFHIEENERIGLIGPNGTGKSSLLKVIA 50
BSNT_01256___ 51 GLESIEEGEITKSGSVQVEFLHQDPELPAGQTVLEHIYSGESAVMKTLRE 100
|.||.|:|:|||.||:.:|:|.|||:|...:|||||||||:|.:|:|:|.
BL02344___yfm 51 GHESTEKGDITKPGSLHIEYLDQDPDLDGPETVLEHIYSGDSVMMRTMRT 100
BSNT_01256___ 101 YEKALYELGKDPENEQRQKHLLAAQAKMDANNAWDANTLAKTVLSKLGVN 150
||:||.||...|::.::|::|||||.|||.:.||||||.|||:|:||||.
BL02344___yfm 101 YEQALQELNAAPDDPKKQENLLAAQGKMDEHGAWDANTAAKTILTKLGVA 150
BSNT_01256___ 151 DVTKPVNELSGGQKKRVAIAKNLIQPADLLILDEPTNHLDNETIEWLEGY 200
||.|.|:.|||||||||||||.||||||||||||||||||||||||||||
BL02344___yfm 151 DVAKEVSSLSGGQKKRVAIAKTLIQPADLLILDEPTNHLDNETIEWLEGY 200
BSNT_01256___ 201 LSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEKRAER 250
||.|||:|:|||||||||||||||||||:||.||||||||||||||||||
BL02344___yfm 201 LSGYPGSVVLVTHDRYFLNRVTNRIYELDRGRLYTYKGNYEVFLEKRAER 250
BSNT_01256___ 251 EAQAEQKETKRQNLLRRELAWLRRGAKARSTKQKARIDRVETLKEQKGPQ 300
||.|||.||||||||||||||||||||||||||||||.|||.||||..|:
BL02344___yfm 251 EALAEQNETKRQNLLRRELAWLRRGAKARSTKQKARIQRVEELKEQDAPE 300
BSNT_01256___ 301 SSGSLDFAIGSHRLGKQVIEAENVMIAYDGRMLVDRFNELVIPGERIGII 350
:..|||||||||||||||||||.|.|:..|..||..||||::||:|||||
BL02344___yfm 301 TGSSLDFAIGSHRLGKQVIEAEGVDISRGGNQLVRSFNELIVPGDRIGII 350
BSNT_01256___ 351 GPNGIGKTTLLNALAGRHTPDGGDITIGQTVRIGYYTQDHSEMNGELKVI 400
|||||||||||||||||..||||.||||||||||||||||||||..|:|:
BL02344___yfm 351 GPNGIGKTTLLNALAGRIKPDGGQITIGQTVRIGYYTQDHSEMNDALQVV 400
BSNT_01256___ 401 DYIKETAEVVKTADGDMITAEQMLERFLFPRSMQQTYIRKLSGGEKRRLY 450
:||||||||||||||.::||||||||||||||:|:..|||||||||||||
BL02344___yfm 401 EYIKETAEVVKTADGQVVTAEQMLERFLFPRSVQRNLIRKLSGGEKRRLY 450
BSNT_01256___ 451 LLQVLMQEPNVLFLDEPTNDLDTETLSVLEDYIDQFPGVVITVSHDRYFL 500
||:|||:|||||||||||||||||||.|||||::||||||:|||||||||
BL02344___yfm 451 LLKVLMEEPNVLFLDEPTNDLDTETLGVLEDYLEQFPGVVVTVSHDRYFL 500
BSNT_01256___ 501 DRVVDRLIVFEGNGVISRFQGSYSDYMEESKAKKAAQKPTAEEKTAEAEP 550
|||||||:||||.|.:||||||||:|||:.| :.:.|||.:| .|||
BL02344___yfm 501 DRVVDRLLVFEGGGNVSRFQGSYSEYMEKQK-ENSRQKPASE----AAEP 545
BSNT_01256___ 551 ----KKKRKKLSYKDQLEWDGIEDKIAQLEEKHEQLEADIAAAGSDFGKI 596
||||||||||||||||||||:||.|||||::||.:||||||||.||
BL02344___yfm 546 VKPEKKKRKKLSYKDQLEWDGIEDRIAALEEKHKRLEEEIAAAGSDFAKI 595
BSNT_01256___ 597 QELMAEQAKTAEELEAAMDRWTELSLMIEELES- 629
|.||.|||:|||||||||:|||||||:|||||.
BL02344___yfm 596 QTLMEEQAQTAEELEAAMERWTELSLLIEELEQS 629
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