Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_01253 and BL02342

See DNA alignment / Visit BSNT_01253 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:45
# Commandline: needle
#    -asequence pep-align/BSNT_01253___yfmS.1.5803.seq
#    -bsequence pep-align/BL02342___yfmS.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01253___yfmS-BL02342___yfmS.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01253___yfmS-BL02342___yfmS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01253___yfmS
# 2: BL02342___yfmS
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 286
# Identity:     230/286 (80.4%)
# Similarity:   253/286 (88.5%)
# Gaps:           3/286 ( 1.0%)
# Score: 1134.5
# 
#
#=======================================

BSNT_01253___      1 MELTINTEKETADILDAFIKVAPYLNSLVQDDITIGIYDTEKLLVNIPAK     50
                     |...:.|  :...:||||:||||:||.|:|||:|:||||||||:||||.|
BL02342___yfm      1 MNEAVKT--DIHPLLDAFVKVAPFLNQLIQDDVTVGIYDTEKLIVNIPGK     48

BSNT_01253___     51 TFSLNVKAGDPLQEGDIITDAIRSNQKKTSMVPKELFGFPLIARAIPLHD    100
                     |||||||||||||||||||||||.|:||.||||||||||||.||||||||
BL02342___yfm     49 TFSLNVKAGDPLQEGDIITDAIRQNKKKVSMVPKELFGFPLAARAIPLHD     98

BSNT_01253___    101 ENGRVIGGVGLGTSLEESSKLHDVAESLSAVVEQTAAAISDISESINGFS    150
                     ||||||||||||||||:|.:||.||||||.:|||||:||.||:||::|||
BL02342___yfm     99 ENGRVIGGVGLGTSLEKSDQLHRVAESLSVIVEQTASAIQDIAESVSGFS    148

BSNT_01253___    151 TQMSGISSQAKKVSESAGEIADISVTVKGISDQSNLLGLNAAIEAARAGE    200
                     .|||.||.|||:||||||||..||||||||||||||||||||||||||||
BL02342___yfm    149 GQMSDISKQAKEVSESAGEIEKISVTVKGISDQSNLLGLNAAIEAARAGE    198

BSNT_01253___    201 SGKGFSVVADEIRKLATHSKENVGQIDQITKKIHSLLKGLEESIESINQH    250
                     ||||||||||||||||||||||||||||||||||:|||.||.|||.||:|
BL02342___yfm    199 SGKGFSVVADEIRKLATHSKENVGQIDQITKKIHALLKDLEHSIEVINEH    248

BSNT_01253___    251 TDGQAAAVEQISATMQEISGSAQHLAKMAEKALEEE    286
                     |.||||.||||||||||||.:||:||||||...|: 
BL02342___yfm    249 TSGQAAGVEQISATMQEISSNAQNLAKMAEHQFED-    283


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.