Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02604 and BL02313

See DNA alignment / Visit BSNT_02604 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:16
# Commandline: needle
#    -asequence pep-align/BSNT_02604___plsX.1.5803.seq
#    -bsequence pep-align/BL02313___plsX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02604___plsX-BL02313___plsX.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02604___plsX-BL02313___plsX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02604___plsX
# 2: BL02313___plsX
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     265/333 (79.6%)
# Similarity:   298/333 (89.5%)
# Gaps:           3/333 ( 0.9%)
# Score: 1327.0
# 
#
#=======================================

BSNT_02604___      1 MRIAVDAMGGDHAPKAVIDGVIKGIEAFDDLHITLVGDKTTIESHLTTTS     50
                     |:|||||||||:||||||:||:|.:|.|:||.|||:||:..|.:|| |..
BL02313___pls      1 MKIAVDAMGGDNAPKAVIEGVMKAVEDFEDLEITLIGDREKIAAHL-TEH     49

BSNT_02604___     51 DRITVLHADEVIEPTDEPVRAVRRKKNSSMVLMAQEVAENRADACISAGN    100
                     .||||.||:||||.||||||||||||||||||||.||||.||||||||||
BL02313___pls     50 GRITVKHAEEVIEATDEPVRAVRRKKNSSMVLMAGEVAEGRADACISAGN     99

BSNT_02604___    101 TGALMTAGLFIVGRIKGIDRPALAPTLPTVSGDGFLLLDVGANVDAKPEH    150
                     |||||||||||||||:||:|||||||||||||||||||||||||||||||
BL02313___pls    100 TGALMTAGLFIVGRIEGIERPALAPTLPTVSGDGFLLLDVGANVDAKPEH    149

BSNT_02604___    151 LVQYAIMGSVYSQQVRGVTSPRVGLLNVGTEDKKGNELTKQTFQILKETA    200
                     |||||||||||.:||.||.:||:|||||||||||||||.|||||.|||| 
BL02313___pls    150 LVQYAIMGSVYGEQVLGVKNPRIGLLNVGTEDKKGNELAKQTFQKLKET-    198

BSNT_02604___    201 NINFIGNVEARDLLDDVADVVVTDGFTGNVTLKTLEGSALSIFKMMRDVM    250
                     ::||||||||||:||.||||:|||||||||.|||:||:|||||||:|..:
BL02313___pls    199 DLNFIGNVEARDMLDGVADVIVTDGFTGNVALKTVEGAALSIFKMLRTTL    248

BSNT_02604___    251 TSTLTSKLAAAVLKPKLKEMKMNMEYSNYGGASLFGLKAPVIKAHGSSDS    300
                     ||:.|:||||:.|||||||||..|:||.||||.||||||||||||||||.
BL02313___pls    249 TSSFTAKLAASALKPKLKEMKTKMDYSEYGGAGLFGLKAPVIKAHGSSDG    298

BSNT_02604___    301 NAVFHAIRQAREMVSQNVAALIQEEVKEEKTDE    333
                     .||:||||||||||||||||.|:|:: ::|.||
BL02313___pls    299 RAVYHAIRQAREMVSQNVAAFIEEKI-QQKADE    330


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