Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02603 and BL02312
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence pep-align/BSNT_02603___ylpC.1.5803.seq
# -bsequence pep-align/BL02312___fapR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02603___ylpC-BL02312___fapR.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02603___ylpC-BL02312___fapR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02603___ylpC
# 2: BL02312___fapR
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 188
# Identity: 163/188 (86.7%)
# Similarity: 175/188 (93.1%)
# Gaps: 0/188 ( 0.0%)
# Score: 793.0
#
#
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BSNT_02603___ 1 MRRNKRERQELLQQTIQATPFITDEELAGKFGVSIQTIRLDRLELSIPEL 50
||::||||||||||||:.||||||||||.||.||||||||||||||||||
BL02312___fap 1 MRKSKRERQELLQQTIRTTPFITDEELAEKFNVSIQTIRLDRLELSIPEL 50
BSNT_02603___ 51 RERIKNVAEKTLEDEVKSLSLDEVIGEIIDLELDDQAISILEIKQEHVFS 100
|||||:||||:||||||||.||||||||||||||:.|||||||::|||||
BL02312___fap 51 RERIKSVAEKSLEDEVKSLPLDEVIGEIIDLELDEHAISILEIRREHVFS 100
BSNT_02603___ 101 RNQIARGHHLFAQANSLAVAVIDDELALTASADIRFTRQVKQGERVVAKA 150
||||||||||||||||||||:|||||||||.|||||||||||||||||||
BL02312___fap 101 RNQIARGHHLFAQANSLAVALIDDELALTAKADIRFTRQVKQGERVVAKA 150
BSNT_02603___ 151 KVTAVEKEKGRTVVEVNSYVGEEIVFSGRFDMYRSKHS 188
||..::|:||||||||||||.||.||||.|.|||||.|
BL02312___fap 151 KVVKLDKDKGRTVVEVNSYVAEEPVFSGEFVMYRSKQS 188
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