Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02591 and BL02304

See DNA alignment / Visit BSNT_02591 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence pep-align/BSNT_02591___yloQ.1.5803.seq
#    -bsequence pep-align/BL02304___cpgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02591___yloQ-BL02304___cpgA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02591___yloQ-BL02304___cpgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02591___yloQ
# 2: BL02304___cpgA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 298
# Identity:     230/298 (77.2%)
# Similarity:   258/298 (86.6%)
# Gaps:           4/298 ( 1.3%)
# Score: 1201.5
# 
#
#=======================================

BSNT_02591___      1 MPEGKIIKALSGFYYVLDESEDSDKVIQCRGRGIFRKNKITPLVGDYVVY     50
                     |||||||||||||||||    |.|:||||||||:|||||:||||||.|||
BL02304___cpg      1 MPEGKIIKALSGFYYVL----DGDQVIQCRGRGVFRKNKVTPLVGDDVVY     46

BSNT_02591___     51 QAENDKEGYLMEIKERTNELIRPPICNVDQAVLVFSAVQPSFSTALLDRF    100
                     ||:||||||::|||:|.|||:||||.|||||||||||.:|:|||:|||||
BL02304___cpg     47 QADNDKEGYILEIKDRFNELVRPPISNVDQAVLVFSAKEPTFSTSLLDRF     96

BSNT_02591___    101 LVLVEANDIQPIICITKMDLIEDQDTEDTIQAYAEDYRNIGYDVYLTSSK    150
                     ||||||.||:||||||||||::|...::.|..||||||||||.|||||.|
BL02304___cpg     97 LVLVEAGDIRPIICITKMDLVDDDALKEQIHQYAEDYRNIGYSVYLTSMK    146

BSNT_02591___    151 DQDSLTDIIPHFQDKTTVFAGQSGVGKSSLLNAISPELGLRTNEISEHLG    200
                     ....:.|||||||||.||||||||||||||||||||:|.|:|..||.|||
BL02304___cpg    147 SGRGIEDIIPHFQDKITVFAGQSGVGKSSLLNAISPDLELKTAGISAHLG    196

BSNT_02591___    201 RGKHTTRHVELIHTSGGLVADTPGFSSLEFTDIEEEELGYTFPDIREKSA    250
                     ||||||||||||..:|||||||||||||||..||.|:||.||.:|.||||
BL02304___cpg    197 RGKHTTRHVELIDINGGLVADTPGFSSLEFAGIEAEDLGQTFLEIGEKSA    246

BSNT_02591___    251 SCKFRGCLHLKEPKCAVKQAVGDGELKQYRYDHYVEFMTEIKDRKPRY    298
                     .||||||||:|||.||||:||.:||:.||||:|||||:||||||||||
BL02304___cpg    247 ECKFRGCLHIKEPNCAVKRAVENGEIAQYRYNHYVEFLTEIKDRKPRY    294


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