Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02591 and BL02304

See Amino acid alignment / Visit BSNT_02591 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:15
# Commandline: needle
#    -asequence dna-align/BSNT_02591___yloQ.1.5803.seq
#    -bsequence dna-align/BL02304___cpgA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02591___yloQ-BL02304___cpgA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02591___yloQ-BL02304___cpgA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02591___yloQ
# 2: BL02304___cpgA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 917
# Identity:     652/917 (71.1%)
# Similarity:   652/917 (71.1%)
# Gaps:          52/917 ( 5.7%)
# Score: 2230.0
# 
#
#=======================================

BSNT_02591___      1 ATGCCTGAGGGCAAAATTATTAAGGCGCTAAGCGGCTTTTACTATGTACT     50
                     |||||||||||||||||.|||||.||..||||.||.||||||||||||.|
BL02304___cpg      1 ATGCCTGAGGGCAAAATCATTAAAGCATTAAGTGGATTTTACTATGTATT     50

BSNT_02591___     51 GGATG--AATCAGAGGATTCAGATAAAGTAATACAATGCAGAGGAAGAGG     98
                     |||||  .|||||              ||.||.||.||||||||||||||
BL02304___cpg     51 GGATGGCGATCAG--------------GTCATTCAGTGCAGAGGAAGAGG     86

BSNT_02591___     99 CATTTTCAGAAAAAACAAAATTACCCCTCTTGTCGGTGATTATGTTGTGT    148
                     ..|||||||||||||.|||.|.||||||||.|||||.||..|||||||.|
BL02304___cpg     87 GGTTTTCAGAAAAAATAAAGTAACCCCTCTCGTCGGCGACGATGTTGTCT    136

BSNT_02591___    149 ATCAAGCTGAAAATGACAAAGAAGGATATTTAATGGAAATTAAAGAAAGA    198
                     |.|||||.||.||.||.||.|||||.||..|..|.||.||||||||.|||
BL02304___cpg    137 ACCAAGCCGATAACGATAAGGAAGGCTACATTCTCGAGATTAAAGACAGA    186

BSNT_02591___    199 ACCAACGAGCTTATCAGGCCGCCAATTTGCAACGTTGATCAAGCGGTCCT    248
                     ..|||.||..|..||||.||.||.||..|||||||.|||||.|||||.||
BL02304___cpg    187 TTCAATGAATTGGTCAGACCTCCGATCAGCAACGTGGATCAGGCGGTTCT    236

BSNT_02591___    249 TGTTTTCTCAGC---GGTTCAGCCTTCTTTCAGCACG--GCATTGCTCGA    293
                     .||.||.||.||   ||   ||||..|.|||||||||  ||.||  |.||
BL02304___cpg    237 CGTGTTTTCGGCAAAGG---AGCCGACATTCAGCACGTCGCTTT--TGGA    281

BSNT_02591___    294 CCGCTTCCTGGTTCTCGTTGAGGCCAATGATATTCAGCCGATTATATGCA    343
                     .||.||..|.||.||.||||||||...|||||||..||||||.|||||||
BL02304___cpg    282 TCGTTTTTTAGTGCTGGTTGAGGCGGGTGATATTAGGCCGATCATATGCA    331

BSNT_02591___    344 TTACTAAAATGGATCTGATTGAAGATCA-----AGATACAGAAGATACGA    388
                     |.||.||||||||.||..|.||.|||.|     .||.|.||.||||.| |
BL02304___cpg    332 TCACGAAAATGGACCTTGTGGATGATGACGCGCTGAAAGAGCAGATTC-A    380

BSNT_02591___    389 TACAAGCCTATGCAGAAGACTATCGGAATATTGGTTATGACGTATACCTT    438
                     | |||   |||||.||||||||.|||||.||.||.||...|||.||..|.
BL02304___cpg    381 T-CAA---TATGCCGAAGACTACCGGAACATCGGGTACAGCGTCTATTTG    426

BSNT_02591___    439 ACCTCCTCTAAGGACCA-------AGACAGTTTAACGGACATCATCCCGC    481
                     ||.||    ||.||..|       ||.|| |..||  |||||||||||.|
BL02304___cpg    427 ACATC----AATGAAAAGCGGAAGAGGCA-TCGAA--GACATCATCCCCC    469

BSNT_02591___    482 ATTTTCAGGATAAAACAACGGTATTTGCCGGTCAGTCCGGTGTTGGAAAA    531
                     |||||||||||||||..||.|||||.|||||.||||||||.||.||.||.
BL02304___cpg    470 ATTTTCAGGATAAAATCACCGTATTCGCCGGCCAGTCCGGCGTGGGCAAG    519

BSNT_02591___    532 TCCTCGCTTCTCAACGCGATCAGTCCGGAGCTCGGATTGAGAACAAACGA    581
                     ||.||||||.|.||.||||||||.||.||.||.|.|.|||.|||...||.
BL02304___cpg    520 TCTTCGCTTTTAAATGCGATCAGCCCTGACCTTGAACTGAAAACCGCCGG    569

BSNT_02591___    582 GATTTCCGAGCATTTGGGCCGCGGGAAACACACAACCCGCCACGTGGAGC    631
                     ||||||||..||.|||||..|.||.|||||.||.||.|||||.|||||||
BL02304___cpg    570 GATTTCCGCCCACTTGGGAAGGGGAAAACATACGACGCGCCATGTGGAGC    619

BSNT_02591___    632 TGATTCACACGTCCGGAGGTTTGGTTGCAGATACGCCGGGATTCAGCTCG    681
                     ||||..|.|....|||.||..|.||.||.||.||.|||||.|||||||||
BL02304___cpg    620 TGATCGATATAAACGGCGGGCTCGTCGCGGACACCCCGGGCTTCAGCTCG    669

BSNT_02591___    682 CTTGAATTTACAGACATTGAGGAAGAAGAGCT-GGGCTATACCTTCCCAG    730
                     |||||.|||.|.|..|||||.|..|||||..| |||| |.||.||....|
BL02304___cpg    670 CTTGAGTTTGCCGGTATTGAAGCTGAAGATTTAGGGC-AGACATTTTTGG    718

BSNT_02591___    731 ATATCAGAGAAAAAAGCGCTTCATGCAAATTTAGAGGCTGTTTACATCTG    780
                     |.|||.|.|||||.|||||...||||||.||..|.||.||..|.|||.|.
BL02304___cpg    719 AAATCGGCGAAAAGAGCGCCGAATGCAAGTTCCGCGGATGCCTGCATATA    768

BSNT_02591___    781 AAAGAGCCGAAATGCGCGGTGAAACAAGCTGTTGGAGACGGGGAATTAAA    830
                     |||||.|||||.|||||.||.||||..||.||.|.|.||||.|||.|...
BL02304___cpg    769 AAAGAACCGAACTGCGCCGTCAAACGCGCCGTGGAAAACGGTGAAATCGC    818

BSNT_02591___    831 GCAGTATCGCTATGACCATTATGTTGAATTTATGACGGAGATTAAAGACA    880
                     .|||||||||||..|||||||||||||||||.|.||.|||||.|||||.|
BL02304___cpg    819 CCAGTATCGCTACAACCATTATGTTGAATTTTTAACAGAGATCAAAGATA    868

BSNT_02591___    881 GAAAGCCGAGGTATTAG    897
                     ||||||||||||||||.
BL02304___cpg    869 GAAAGCCGAGGTATTAA    885


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02591 and BL02304

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
