Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02587 and BL02299
See
DNA alignment /
Visit
BSNT_02587 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence pep-align/BSNT_02587___yloM.1.5803.seq
# -bsequence pep-align/BL02299___rsmB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02587___yloM-BL02299___rsmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02587___yloM-BL02299___rsmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02587___yloM
# 2: BL02299___rsmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 449
# Identity: 340/449 (75.7%)
# Similarity: 394/449 (87.8%)
# Gaps: 3/449 ( 0.7%)
# Score: 1793.0
#
#
#=======================================
BSNT_02587___ 1 MKKTSVRDIALEALIKLEQNQAYSNLLLKSVIKSNELSDQDRGLLTELVY 50
.|.:||::||:|||||:||||||||||:|.:|:|:|||:||||||||||
BL02299___rsm 1 -MKNNVREVALDALIKLDQNQAYSNLLLQSAMKANDLSDKDRGLLTELVY 49
BSNT_02587___ 51 GTLQNKIALDYMLKPFINKPQKVKPWVIQLLRLSLYQMEYLEKIPDRAAI 100
||||||:||||||||||.||:|||.|||.|||:||||||||||||||||:
BL02299___rsm 50 GTLQNKLALDYMLKPFIKKPEKVKDWVIHLLRMSLYQMEYLEKIPDRAAL 99
BSNT_02587___ 101 HEAVEIAKIRGHKGIASFVNGVLRSIQREGVPSFDAIEDPVRRLATETSH 150
.|||||||.||||||:|||||||||:||||||||..|.||:.|||.||||
BL02299___rsm 100 FEAVEIAKRRGHKGISSFVNGVLRSVQREGVPSFADIADPIERLAVETSH 149
BSNT_02587___ 151 PEWLVKEWADAYGFEAAEKICRIHLIPPKQTLRVNQMKADRAELLDQMAA 200
|||||:||.|||||||||:|||||:||||||:|||::|.||..||.::..
BL02299___rsm 150 PEWLVREWTDAYGFEAAEQICRIHMIPPKQTIRVNRLKNDRDTLLSRLNE 199
BSNT_02587___ 201 EGIEVEKGDLAEDAVKLLKGTIAGTHFFQNGEVSIQDESSMLVARALDPK 250
.|||.|:|||::|||||||||||.|.||:.|||:|||||||||||||.|:
BL02299___rsm 200 AGIEAEEGDLSKDAVKLLKGTIASTPFFKEGEVTIQDESSMLVARALGPE 249
BSNT_02587___ 251 PDETVLDACAAPGGKSAHIAELMQNKGSVTSLDLHKHKVKLIKEAADRLG 300
..||||||||||||||.||.||:::.|.|.|||||:||||||||||.|:|
BL02299___rsm 250 RGETVLDACAAPGGKSTHIGELLEDTGKVVSLDLHQHKVKLIKEAAGRIG 299
BSNT_02587___ 301 LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPDMKYTKKP 350
|:.|.|..:|||||||.||.|||||||||||||||||||||||:||:|.|
BL02299___rsm 300 LSNIEARALDARKAGEVFEPEQFDRILVDAPCSGFGVIRRKPDLKYSKTP 349
BSNT_02587___ 351 DDSARLAEIQLSILREIAPLVKKGGTLVYSTCTMDRTENDEVIHAFIQEH 400
:||||||.|||:||.|||||:|.||||||||||||.|||::|:|||::||
BL02299___rsm 350 EDSARLAGIQLAILNEIAPLLKTGGTLVYSTCTMDPTENEQVMHAFLEEH 399
BSNT_02587___ 401 PDFEPDLSLEKRLPEKVRPFVRDGRLQILPHYFGTDGFFICSMRKKG-- 447
.:||.|.:|.:|||||..|:|:||.:|||||||||||||||||||||
BL02299___rsm 400 DEFEADPTLAERLPEKAAPYVKDGSIQILPHYFGTDGFFICSMRKKGSQ 448
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.