Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02581 and BL02294

See DNA alignment / Visit BSNT_02581 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence pep-align/BSNT_02581___rpoZ.1.5803.seq
#    -bsequence pep-align/BL02294___rpoZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02581___rpoZ-BL02294___rpoZ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02581___rpoZ-BL02294___rpoZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02581___rpoZ
# 2: BL02294___rpoZ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      56/67 (83.6%)
# Similarity:    61/67 (91.0%)
# Gaps:           1/67 ( 1.5%)
# Score: 276.0
# 
#
#=======================================

BSNT_02581___      1 MLDPSIDSLMNKLDSKYTLVTVSARRAREMQIKKDQMIEHTISHKYVGKA     50
                     |||||||||||||||||||||||||||||||:.||..||:..|||:||||
BL02294___rpo      1 MLDPSIDSLMNKLDSKYTLVTVSARRAREMQMNKDAQIENPKSHKFVGKA     50

BSNT_02581___     51 LEEIDAGLLSFEKEDRE     67
                     |||||||||:||||:| 
BL02294___rpo     51 LEEIDAGLLTFEKENR-     66


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