Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02581 and BL02294
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02581___rpoZ.1.5803.seq
# -bsequence dna-align/BL02294___rpoZ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02581___rpoZ-BL02294___rpoZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02581___rpoZ-BL02294___rpoZ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02581___rpoZ
# 2: BL02294___rpoZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 163/207 (78.7%)
# Similarity: 163/207 (78.7%)
# Gaps: 9/207 ( 4.3%)
# Score: 653.0
#
#
#=======================================
BSNT_02581___ 1 ATGTTAGATCCGTCAATTGATTCTTTAATGAATAAATTAGATTCAAAATA 50
|||.||||||||||||||||.|||||||||||.|||.|.|||||||||||
BL02294___rpo 1 ATGCTAGATCCGTCAATTGACTCTTTAATGAACAAACTGGATTCAAAATA 50
BSNT_02581___ 51 TACGCTCGTGACTGTTTCTGCGAGACGCGCCCGTGAAATGCAAATCAAAA 100
.||||||||.||.||.||.||..|.||||||||.||||||||.||.||.|
BL02294___rpo 51 CACGCTCGTTACCGTATCCGCACGGCGCGCCCGCGAAATGCAGATGAACA 100
BSNT_02581___ 101 AAGAC---CAAATGATTGAACATACGATTTCACACAAATATGTAGGCAAA 147
||||| || |||.|||.||.|||..||.||.||||.||||||||||
BL02294___rpo 101 AAGACGCGCA---GATCGAAAATCCGAAGTCGCATAAATTTGTAGGCAAA 147
BSNT_02581___ 148 GCTTTAGAAGAAATTGATGCAGGCCTGCTTTCGTTTGAAAAGGAAGACCG 197
||.||.||||||||||||||.||.||||||.|.||.|||||||||.|.||
BL02294___rpo 148 GCATTGGAAGAAATTGATGCCGGACTGCTTACATTCGAAAAGGAAAATCG 197
BSNT_02581___ 198 CGAATAG 204
|.||
BL02294___rpo 198 CTAA--- 201
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