Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02581 and BL02294

See Amino acid alignment / Visit BSNT_02581 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence dna-align/BSNT_02581___rpoZ.1.5803.seq
#    -bsequence dna-align/BL02294___rpoZ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02581___rpoZ-BL02294___rpoZ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02581___rpoZ-BL02294___rpoZ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02581___rpoZ
# 2: BL02294___rpoZ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity:     163/207 (78.7%)
# Similarity:   163/207 (78.7%)
# Gaps:           9/207 ( 4.3%)
# Score: 653.0
# 
#
#=======================================

BSNT_02581___      1 ATGTTAGATCCGTCAATTGATTCTTTAATGAATAAATTAGATTCAAAATA     50
                     |||.||||||||||||||||.|||||||||||.|||.|.|||||||||||
BL02294___rpo      1 ATGCTAGATCCGTCAATTGACTCTTTAATGAACAAACTGGATTCAAAATA     50

BSNT_02581___     51 TACGCTCGTGACTGTTTCTGCGAGACGCGCCCGTGAAATGCAAATCAAAA    100
                     .||||||||.||.||.||.||..|.||||||||.||||||||.||.||.|
BL02294___rpo     51 CACGCTCGTTACCGTATCCGCACGGCGCGCCCGCGAAATGCAGATGAACA    100

BSNT_02581___    101 AAGAC---CAAATGATTGAACATACGATTTCACACAAATATGTAGGCAAA    147
                     |||||   ||   |||.|||.||.|||..||.||.||||.||||||||||
BL02294___rpo    101 AAGACGCGCA---GATCGAAAATCCGAAGTCGCATAAATTTGTAGGCAAA    147

BSNT_02581___    148 GCTTTAGAAGAAATTGATGCAGGCCTGCTTTCGTTTGAAAAGGAAGACCG    197
                     ||.||.||||||||||||||.||.||||||.|.||.|||||||||.|.||
BL02294___rpo    148 GCATTGGAAGAAATTGATGCCGGACTGCTTACATTCGAAAAGGAAAATCG    197

BSNT_02581___    198 CGAATAG    204
                     |.||   
BL02294___rpo    198 CTAA---    201


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