Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02572 and BL02289

See DNA alignment / Visit BSNT_02572 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:13
# Commandline: needle
#    -asequence pep-align/BSNT_02572___ylnF.1.5803.seq
#    -bsequence pep-align/BL02289___sirA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02572___ylnF-BL02289___sirA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02572___ylnF-BL02289___sirA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02572___ylnF
# 2: BL02289___sirA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 164
# Identity:      85/164 (51.8%)
# Similarity:   118/164 (72.0%)
# Gaps:           2/164 ( 1.2%)
# Score: 445.0
# 
#
#=======================================

BSNT_02572___      1 MLPLHISLEKKKVVIAGGGSIALRRLKSVISEGADITLVSPDVEPEIKQM     50
                     ||||||:::.|..||||||.||.||||:|::|||..|::||:...|:..:
BL02289___sir      1 MLPLHINMKGKAAVIAGGGKIAARRLKTVLAEGASATVISPEASEEMLGL     50

BSNT_02572___     51 AEERRIKWEKRTIEKEDYLNAFFIIAATDNAAVNKEIAQSASPFQLVNCV    100
                     ..|..|:|:|:..|..|:.|||.||.|||:...||.:|.||:|.||||..
BL02289___sir     51 INEHGIEWKKKKAEPGDFKNAFLIILATDDHEANKRLAASAAPEQLVNVA    100

BSNT_02572___    101 SDAELGNVYMPKIVKRGHVTVSVSTSGASPKHTKELAENVDKLIDGDFIA    150
                     |:|||||||:|||:.||::|:||||:||||:||..||..:|.|||.:.:.
BL02289___sir    101 SEAELGNVYVPKIINRGNITISVSTNGASPRHTIRLAGQIDDLIDDELVQ    150

BSNT_02572___    151 EVNRLYQVRRKK--    162
                     |::.|::.||..  
BL02289___sir    151 EIDELFRKRRGLNP    164


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