Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02552 and BL02270

See DNA alignment / Visit BSNT_02552 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:10
# Commandline: needle
#    -asequence pep-align/BSNT_02552___ylyB.1.5803.seq
#    -bsequence pep-align/BL02270___ylyB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02552___ylyB-BL02270___ylyB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02552___ylyB-BL02270___ylyB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02552___ylyB
# 2: BL02270___ylyB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 304
# Identity:     252/304 (82.9%)
# Similarity:   274/304 (90.1%)
# Gaps:           1/304 ( 0.3%)
# Score: 1354.0
# 
#
#=======================================

BSNT_02552___      1 MNQIDITASEEQKSERIDKFLASSENDWSRTQVQQWVKDGQVVVNGSAVK     50
                     |...|:|..||.|.|||||:|.:.|.||||||||||:|:.:|:|||:|||
BL02270___yly      1 MEHYDMTVHEEHKGERIDKYLTAVEADWSRTQVQQWIKEDRVLVNGNAVK     50

BSNT_02552___     51 ANYKIQPGDQVTVTVPEPEALDVLAEPMDLDIYYEDQDVLVVNKPRGMVV    100
                     ||||:|.||.|:|.|||||.|||.||||||||||||||||||||||||||
BL02270___yly     51 ANYKVQEGDAVSVQVPEPEPLDVTAEPMDLDIYYEDQDVLVVNKPRGMVV    100

BSNT_02552___    101 HPAPGHLTGTLVNGLMAHCTDLSGINGVMRPGIVHRIDKDTSGLLMVAKN    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BL02270___yly    101 HPAPGHLTGTLVNGLMAHCDDLSGINGVMRPGIVHRIDKDTSGLLMVAKN    150

BSNT_02552___    151 DMAHESLVNQLVNKTVTRKYTAVVHGLISHDDGTIDAPIGRDKKDRQSMT    200
                     ||||||||||||||||||||||:|||:|.||.||||||||||||||||||
BL02270___yly    151 DMAHESLVNQLVNKTVTRKYTALVHGVIPHDHGTIDAPIGRDKKDRQSMT    200

BSNT_02552___    201 VTRD-GKSAVTHFHVLERFQDFTLVECQLETGRTHQIRVHMRYIGFPLAG    249
                     |||: ||.|||||.|:|||.|||:|||||||||||||||||:||||||||
BL02270___yly    201 VTRENGKHAVTHFEVIERFDDFTVVECQLETGRTHQIRVHMKYIGFPLAG    250

BSNT_02552___    250 DPKYGPRKTIDFNGQALHAGVLGFDHPRTGEYVEFEAPLPEDMAELIENL    299
                     ||||||:||:|||||.||||||||||||||||||||||||:||..|::.:
BL02270___yly    251 DPKYGPKKTVDFNGQVLHAGVLGFDHPRTGEYVEFEAPLPDDMKNLLDKI    300

BSNT_02552___    300 RKNG    303
                     |...
BL02270___yly    301 RNKR    304


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.