Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02552 and BL02270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02552___ylyB.1.5803.seq
# -bsequence dna-align/BL02270___ylyB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02552___ylyB-BL02270___ylyB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02552___ylyB-BL02270___ylyB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02552___ylyB
# 2: BL02270___ylyB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 924
# Identity: 697/924 (75.4%)
# Similarity: 697/924 (75.4%)
# Gaps: 21/924 ( 2.3%)
# Score: 2517.5
#
#
#=======================================
BSNT_02552___ 1 ATGAATCAAATTGATATAACCGCTTCA-GAAGAACAAAAAAGTGAGCGGA 49
|||.|.||...||||||.|||| |||| ||||||||.|||.||||.||||
BL02270___yly 1 ATGGAGCATTATGATATGACCG-TTCATGAAGAACATAAAGGTGAACGGA 49
BSNT_02552___ 50 TTGATAAATTTTTG---GCATCGTCTGAGAATGATTGGTCAAGAACCCAG 96
||||.||.|..||| ||| || |||....||||||||..|.||.||.
BL02270___yly 50 TTGACAAGTACTTGACCGCA--GT-TGAAGCGGATTGGTCGCGGACTCAA 96
BSNT_02552___ 97 GTTCAGCAATGGGTAAAAGACGGACAG-GTTGTCGTGAACGGAAGCGCGG 145
||.|||||.|||.|.||||| .|||.| ||..|.||.|||||||..||||
BL02270___yly 97 GTACAGCAGTGGATTAAAGA-AGACCGTGTGCTGGTTAACGGAAATGCGG 145
BSNT_02552___ 146 TGAAAGCGAATTATAAAATTCAGCCGGGTGATCAGGTGACCGTCACTGTA 195
|||||||.|||||||||.|||||...||.|||..||||.|.|||...||.
BL02270___yly 146 TGAAAGCCAATTATAAAGTTCAGGAAGGGGATGCGGTGTCAGTCCAGGTT 195
BSNT_02552___ 196 CCCGAACCGGAAGCGCTCGACGTCCTGGCAGAGCCTATGGATCTGGATAT 245
||||||||||||.||||.||.|||..|||.||.||.||||||||.|||||
BL02270___yly 196 CCCGAACCGGAACCGCTGGATGTCACGGCTGAACCGATGGATCTTGATAT 245
BSNT_02552___ 246 TTATTATGAGGACCAGGATGTGCTGGTCGTCAACAAACCTCGCGGAATGG 295
||||||||||||||||||.||.||||||||||||||.||.||.|||||||
BL02270___yly 246 TTATTATGAGGACCAGGACGTACTGGTCGTCAACAAGCCGCGGGGAATGG 295
BSNT_02552___ 296 TTGTTCACCCAGCACCCGGGCATCTTACGGGCACACTTGTAAACGGCCTT 345
|.|||||.||.||.|||||.|||.|.||.||.||.||.||.||.||..|.
BL02270___yly 296 TCGTTCATCCGGCTCCCGGCCATTTGACAGGGACGCTAGTCAATGGTTTG 345
BSNT_02552___ 346 ATGGCTCATTG-CACAGACCTTTCCGGAATAAATGGCGTGATGCGTCCGG 394
|||||.||||| .|| |||||.||.||.||.||.|||||||||.|.||||
BL02270___yly 346 ATGGCGCATTGTGAC-GACCTGTCAGGCATCAACGGCGTGATGAGACCGG 394
BSNT_02552___ 395 GTATTGTTCACAGAATCGATAAGGACACGTCCGGTTTATTAATGGTGGCG 444
|.||.||.|||.|.||.|||||||||||.||.||..|.||.|||||.||.
BL02270___yly 395 GGATCGTCCACCGGATTGATAAGGACACTTCAGGCCTGTTGATGGTTGCC 444
BSNT_02552___ 445 AAAAATGATATGGCACACGAGTCACTCGTAAACCAATTGGTCAACAAAAC 494
|||||.||.|||||.||.|||||.|||||.|||||..|.|||||||||||
BL02270___yly 445 AAAAACGACATGGCGCATGAGTCGCTCGTGAACCAGCTTGTCAACAAAAC 494
BSNT_02552___ 495 GGTCACCCGAAAATATACGGCCGTTGTCCACGGGCTTATTTCTCACGATG 544
.||.||..|||||||.||.||..|.||||||||..|.||..|.||.||..
BL02270___yly 495 AGTAACGAGAAAATACACCGCGCTCGTCCACGGCGTCATCCCGCATGACC 544
BSNT_02552___ 545 ACGGCACAATTGACGCGCCGATCGGACGAGATAAGAAAGACCGTCAAAGC 594
||||.||.||.||||||||||||||..|.|||||.||||||.|.||.||.
BL02270___yly 545 ACGGGACGATCGACGCGCCGATCGGCAGGGATAAAAAAGACAGGCAGAGT 594
BSNT_02552___ 595 ATGACCGTGACACGTG---ATGGCAAAAGC--GCTGTCACTCATTTTCAT 639
|||||.||.|||.|.| |.|| ||||| ||.||||||||||||.|.
BL02270___yly 595 ATGACGGTTACAAGGGAAAACGG--AAAGCATGCCGTCACTCATTTTGAA 642
BSNT_02552___ 640 GTACTAGAGCGTTTTCAGGATTTTACGTTAGTGGAATGCCAGCTTGAAAC 689
|||.|.||.||.||..|.||||||||..|.||.|||||||||||||||||
BL02270___yly 643 GTAATCGAACGGTTCGACGATTTTACTGTCGTTGAATGCCAGCTTGAAAC 692
BSNT_02552___ 690 AGGGAGAACCCATCAAATTCGTGTTCATATGAGATATATCGGCTTCCCAT 739
.||||||||||||||||||||.||.|||||||.||||||||||||.||..
BL02270___yly 693 GGGGAGAACCCATCAAATTCGCGTGCATATGAAATATATCGGCTTTCCTC 742
BSNT_02552___ 740 TAGCAGGCGATCCGAAATACGGCCCAAGAAAAACAATCGACTTTAATGGC 789
|.||.||.||||||||||||||.||.|.|||.||..||||.||.||.|||
BL02270___yly 743 TCGCGGGAGATCCGAAATACGGACCGAAAAAGACGGTCGATTTCAACGGC 792
BSNT_02552___ 790 CAAGCGCTTCACGCGGGAGTTTTAGGTTTTGACCATCCACGAACAGGAGA 839
||.|.|||.||.|||||.||.||.||.|||||||||||.||.||.|||||
BL02270___yly 793 CAGGTGCTGCATGCGGGCGTATTGGGGTTTGACCATCCGCGTACGGGAGA 842
BSNT_02552___ 840 ATATGTCGAATTTGAAGCGCCGCTTCCTGAGGATATGGCAGAATTAATCG 889
||||||.||||||||.|||||.||.|||||.||.|||..|.|..|..|||
BL02270___yly 843 ATATGTTGAATTTGAGGCGCCTCTGCCTGACGACATGAAAAACCTCCTCG 892
BSNT_02552___ 890 A-AAACCTCAGAAAAAATGGTTGA 912
| |||..|| ||||.||..|||||
BL02270___yly 893 ACAAAATTC-GAAATAAACGTTGA 915
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