Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02539 and BL02261
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence pep-align/BSNT_02539___ylmE.1.5803.seq
# -bsequence pep-align/BL02261___ylmE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02539___ylmE-BL02261___ylmE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02539___ylmE-BL02261___ylmE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02539___ylmE
# 2: BL02261___ylmE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 231
# Identity: 163/231 (70.6%)
# Similarity: 198/231 (85.7%)
# Gaps: 1/231 ( 0.4%)
# Score: 848.0
#
#
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BSNT_02539___ 1 MRVVDNLRHINERINEACNRSGRSSDEVTVIAVTKYVSPERAQEAVDAGI 50
|.|..||||||:||||||.::||:.||::||||||||||||||.|:||||
BL02261___ylm 1 MDVKSNLRHINDRINEACIKAGRTPDEISVIAVTKYVSPERAQAALDAGI 50
BSNT_02539___ 51 TCLGENRDAELLRKQELMK-GNPEWHFIGSLQSRKAKSVVNAVSYIHSLD 99
..||||||..||.|.:::| ..|.|||||:||:||.|::::.||||||||
BL02261___ylm 51 RHLGENRDTGLLHKLDVLKDSEPVWHFIGTLQTRKVKAIIDHVSYIHSLD 100
BSNT_02539___ 100 RLSLAKEIEKRAEGTVRCFVQVNTSLEPSKHGMKKEEVIPFIQELSGFEH 149
|||||.||:|||:..:.||||||||||||||||.||||:||:::|||:|:
BL02261___ylm 101 RLSLADEIQKRAKKPIDCFVQVNTSLEPSKHGMAKEEVLPFVKKLSGYEN 150
BSNT_02539___ 150 ILVAGLMTMAPLTDDQDQIRSCFRSLRELRDQVQKLNQPNAPCTELSMGM 199
|.:||||||||.|||:..||||||.||||||:|:.|:|.||||:||||||
BL02261___ylm 151 IRIAGLMTMAPFTDDEKAIRSCFRLLRELRDEVRGLDQWNAPCSELSMGM 200
BSNT_02539___ 200 SNDFEIAIEEGATYIRIGSSLVGNETGGVQQ 230
|||:.||:|||||::|||||||||||||.|.
BL02261___ylm 201 SNDYAIAVEEGATFVRIGSSLVGNETGGGQS 231
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