Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02538 and BL02260

See DNA alignment / Visit BSNT_02538 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_02538___ylmD.1.5803.seq
#    -bsequence pep-align/BL02260___ylmD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02538___ylmD-BL02260___ylmD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02538___ylmD-BL02260___ylmD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02538___ylmD
# 2: BL02260___ylmD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 279
# Identity:     159/279 (57.0%)
# Similarity:   197/279 (70.6%)
# Gaps:          16/279 ( 5.7%)
# Score: 860.0
# 
#
#=======================================

BSNT_02538___      1 ---------------MIQDWAQTNQNNKEVIAGFTTKNGGVSQKPFESLN     35
                                    :|::|.||.:....|.|||||||||.|:.||.|||
BL02260___ylm      1 MNTYNPFRLDAPSMLLIEEWNQTAETGGAVTAGFTTKNGGESEPPFHSLN     50

BSNT_02538___     36 TGLHVHDKDADVVKNREYIADMFNTDLQSWVFADQTHDNRVQKVTQRDRG     85
                     |||||.|.:..|:.||:.:||:..|||..||||||||::|:.|||..||.
BL02260___ylm     51 TGLHVQDHEQHVINNRKKVADILKTDLHDWVFADQTHEDRIHKVTDGDRA    100

BSNT_02538___     86 KGAREYHTALKATDGLYTNEKNVFLALCFADCVPLFFYDPVKSLVGVAHA    135
                     .||..|.|||||||||||:..|:|||||||||||::|||||:||||:|||
BL02260___ylm    101 SGAFRYDTALKATDGLYTDRPNLFLALCFADCVPVYFYDPVRSLVGIAHA    150

BSNT_02538___    136 GWKGTVKQIGREMVKQWTEKEGSNPSDIYAVIGPSISGACYTVDDRVMDA    185
                     |||||...|...||..|..:|||||:||.|||||:|...||||||.|:|.
BL02260___ylm    151 GWKGTALGIAASMVDMWIRREGSNPADIRAVIGPAIGSCCYTVDDHVIDK    200

BSNT_02538___    186 VRALPV-SADLAVNQTAKAQYQLDLKELNRLILMDSGLASEQISVSGLCT    234
                     :|.||: ..|.|.....:.:|:|:|||:||.:|:.:|:.:.||.||.|||
BL02260___ylm    201 IRNLPLQQEDKAFLTIKEGEYRLELKEVNRQLLVHAGIPNGQIEVSSLCT    250

BSNT_02538___    235 ESEPSLFYSHRRDQGKTGRMMSFIGMKEA    263
                     ..|.|||:|||||:|||||||||||:||.
BL02260___ylm    251 SCERSLFFSHRRDRGKTGRMMSFIGLKEV    279


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