Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02533 and BL02257

See DNA alignment / Visit BSNT_02533 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_02533___ylmA.1.5803.seq
#    -bsequence pep-align/BL02257___ylmA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02533___ylmA-BL02257___ylmA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02533___ylmA-BL02257___ylmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02533___ylmA
# 2: BL02257___ylmA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     191/265 (72.1%)
# Similarity:   228/265 (86.0%)
# Gaps:           1/265 ( 0.4%)
# Score: 1013.0
# 
#
#=======================================

BSNT_02533___      1 MILQLDNVSLKRNGKWILRDIHWKVEEKENWVLYGLNGAGKTALLNMLCS     50
                     |:|||::.||||||:|||:||.|.||:.|:|.|||||||||||||||||:
BL02257___ylm      1 MVLQLEHASLKRNGEWILKDIDWTVEKGEHWALYGLNGAGKTALLNMLCA     50

BSNT_02533___     51 YYFPTSGEMQVLGHEFGKTELGEKLRRKIGLVSAALQQKLYPADSAFEIA    100
                     |||||.|::.|||.||||||||||||||||||||||||||||.||||||.
BL02257___ylm     51 YYFPTIGKVTVLGREFGKTELGEKLRRKIGLVSAALQQKLYPEDSAFEIV    100

BSNT_02533___    101 LSGAYASIGLYETPSKETREKAIGLLEDLGAIEYADRRYETLSQGEKQRA    150
                     ||||:|||||||:||:..||||:.|||:.|:|.|||||||||||||||:.
BL02257___ylm    101 LSGAFASIGLYESPSQSVREKAVALLEEFGSIRYADRRYETLSQGEKQKV    150

BSNT_02533___    151 LIARALMADPELLILDEPVTGLDFIAREKLLDTITYIANKENAPSILYVT    200
                     ||||||||||||||||||||||||||||::|||:..||.|::|||:||||
BL02257___ylm    151 LIARALMADPELLILDEPVTGLDFIAREQVLDTVEQIAKKDSAPSMLYVT    200

BSNT_02533___    201 HHAEEILPVFDKALLLKQGEVFGSGEIKEMLTDQVLSAFFDTPIHVLWNQ    250
                     ||||||||.|.:.||||:||||..|:.:||::.:|||.|||.|:..:|.:
BL02257___ylm    201 HHAEEILPAFSQTLLLKKGEVFALGKTREMMSGEVLSEFFDMPVQAVWTE    250

BSNT_02533___    251 DRPFLTRAEPIT-NA    264
                     |||:|::.:... |.
BL02257___ylm    251 DRPYLSKKKTANLNV    265


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.