Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02531 and BL02255
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence pep-align/BSNT_02531___sigE.1.5803.seq
# -bsequence pep-align/BL02255___sigE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02531___sigE-BL02255___sigE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02531___sigE-BL02255___sigE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02531___sigE
# 2: BL02255___sigE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 230/239 (96.2%)
# Similarity: 237/239 (99.2%)
# Gaps: 0/239 ( 0.0%)
# Score: 1155.0
#
#
#=======================================
BSNT_02531___ 1 MKKLKLRLTHLWYKLLMKLGLKSDEVYYIGGSEALPPPLSKDEEQVLLMK 50
|||||||||:|||||||||||||||:||||||||||||||||||||||.|
BL02255___sig 1 MKKLKLRLTYLWYKLLMKLGLKSDEIYYIGGSEALPPPLSKDEEQVLLHK 50
BSNT_02531___ 51 LPNGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVN 100
||:|||||||||||||||||||||||||||||||||||||||||||||||
BL02255___sig 51 LPDGDQAARAILIERNLRLVVYIARKFENTGINIEDLISIGTIGLIKAVN 100
BSNT_02531___ 101 TFNPEKKIKLATYASRCIENEILMYLRRNNKIRSEVSFDEPLNIDWDGNE 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BL02255___sig 101 TFNPEKKIKLATYASRCIENEILMYLRRNNKIRSEVSFDEPLNIDWDGNE 150
BSNT_02531___ 151 LLLSDVLGTDDDIITKDIEANVDKKLLKKALEQLNEREKQIMELRFGLVG 200
|||||||||::||||||||||||||||||||||||:||||||||||||||
BL02255___sig 151 LLLSDVLGTENDIITKDIEANVDKKLLKKALEQLNDREKQIMELRFGLVG 200
BSNT_02531___ 201 EEEKTQKDVADMMGISQSYISRLEKRIIKRLRKEFNKMV 239
.|||||||||||:||||||||||||||||||||||||||
BL02255___sig 201 GEEKTQKDVADMLGISQSYISRLEKRIIKRLRKEFNKMV 239
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