Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_02530 and BL02254

See DNA alignment / Visit BSNT_02530 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:09
# Commandline: needle
#    -asequence pep-align/BSNT_02530___spoIIGA.1.5803.seq
#    -bsequence pep-align/BL02254___spoIIGA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02530___spoIIGA-BL02254___spoIIGA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02530___spoIIGA-BL02254___spoIIGA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02530___spoIIGA
# 2: BL02254___spoIIGA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     214/309 (69.3%)
# Similarity:   260/309 (84.1%)
# Gaps:           0/309 ( 0.0%)
# Score: 1163.0
# 
#
#=======================================

BSNT_02530___      1 MKIYLDVIWLLNFCFDALLLLLTAFILKRHVKKRRLVGGAFIGSSIVLLM     50
                     |:||||.|||||||||.|||::|||||||.||||||:.|||:.|||||.|
BL02254___spo      1 MEIYLDAIWLLNFCFDLLLLMMTAFILKRRVKKRRLILGAFVASSIVLFM     50

BSNT_02530___     51 FTPFSPIVEHPAGKLAFSVVIVVVTFGFKRFRFFFQNLFSFYFATFLMGG    100
                     ||||||.|.||||||:||||||:|.|||||||||.|||||||||||||||
BL02254___spo     51 FTPFSPYVLHPAGKLSFSVVIVLVAFGFKRFRFFLQNLFSFYFATFLMGG    100

BSNT_02530___    101 GIIGAHSLLQSNSIVQNGVMITNQTGFGDPISWLFIVAGFPALWFFSKRR    150
                     |||||||||:::||::|||.:||.:|||||:||||:..||.|:|.|||:|
BL02254___spo    101 GIIGAHSLLETDSIMENGVFMTNWSGFGDPVSWLFVCVGFAAVWLFSKKR    150

BSNT_02530___    151 IEDIETKNIQYEERVSVQADLGSQTLHVRGLIDSGNQLYDPLTKTPVMII    200
                     .||.|.|.|||||||.::|.:|..|||..||||||||||||:|||||||:
BL02254___spo    151 FEDAEAKKIQYEERVRLEACIGEHTLHFTGLIDSGNQLYDPITKTPVMIV    200

BSNT_02530___    201 YIDKLEPIFGTAETMIIRNTDPLEAIEQLDDSFRFLDKMRLIPYRGVGQQ    250
                     .|:||:.:.|...::.|:...||:|:.:||::..::.::|||||||||.|
BL02254___spo    201 NIEKLKVVLGEEASVTIKEMSPLDAVGKLDEALPYIGRIRLIPYRGVGHQ    250

BSNT_02530___    251 NQFLLCVKPDHVTIMTKEEMISADKCLIGISTTKLSADGEFDAIIHPKML    300
                     :|||||:|||||.:.|:.|:|.|.||||||||:.||||||||||:|||||
BL02254___spo    251 HQFLLCLKPDHVLVCTEREVIEAPKCLIGISTSPLSADGEFDAIVHPKML    300

BSNT_02530___    301 SGKAVKHVS    309
                     :|..|||||
BL02254___spo    301 AGNPVKHVS    309


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.