Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02530 and BL02254
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence dna-align/BSNT_02530___spoIIGA.1.5803.seq
# -bsequence dna-align/BL02254___spoIIGA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02530___spoIIGA-BL02254___spoIIGA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02530___spoIIGA-BL02254___spoIIGA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02530___spoIIGA
# 2: BL02254___spoIIGA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 966
# Identity: 670/966 (69.4%)
# Similarity: 670/966 (69.4%)
# Gaps: 72/966 ( 7.5%)
# Score: 2161.5
#
#
#=======================================
BSNT_02530___ 1 GTGAAAATCTATTTAGATGTCATTTGGCTGTTAAACTTTTGTTTTGA--T 48
|||.|||||||||||||||..||.||||||||||||||||||||||| |
BL02254___spo 1 GTGGAAATCTATTTAGATGCGATATGGCTGTTAAACTTTTGTTTTGACTT 50
BSNT_02530___ 49 GCACTTTTGCTTT---TGCTCACGGCATTTATTTTAAAACGGCATGTAAA 95
|| |||||| ||.|.||.||||||||||||||.||....||.||
BL02254___spo 51 GC-----TGCTTTTAATGATGACCGCATTTATTTTAAAGCGAAGGGTTAA 95
BSNT_02530___ 96 AAAAAGAAGACTGGTAGGCGGAGCGTTCATCGGTTCCAGTATTGTCCTTT 145
|||..|.||.|||.|....||.||.||..|||..||.||.||.||.||.|
BL02254___spo 96 AAAGCGGAGGCTGATCCTAGGGGCATTTGTCGCGTCAAGCATCGTTCTGT 145
BSNT_02530___ 146 TGATGTTTACTCCTTTTTCGCCGATTGTTGAACATCCGGCTGGGAAGCTA 195
|.||||||||.||||||||.|||...||....|||||.||.||.||.||.
BL02254___spo 146 TTATGTTTACACCTTTTTCACCGTACGTCCTTCATCCTGCCGGCAAACTG 195
BSNT_02530___ 196 GCTTTTTCAGTTGTGATTGTGGTGGTGACATTTGGCTTTAAAAGATTTCG 245
.|.|||||.||||||||.||..|.|||.|||||||.|||||..|.||.||
BL02254___spo 196 TCGTTTTCGGTTGTGATCGTTCTTGTGGCATTTGGTTTTAAGCGGTTCCG 245
BSNT_02530___ 246 GTTTTTCTTTCAAAATTTGTTTTCCTTTTATTTTGCCACTTTTTTAATGG 295
||||||.||.||.|||||||||||.|||||||||||||||||||||||||
BL02254___spo 246 GTTTTTTTTGCAGAATTTGTTTTCTTTTTATTTTGCCACTTTTTTAATGG 295
BSNT_02530___ 296 GGGGAGGAATTATCGGAGCCCATTCTTTGCTGCAGTCAA----ATTCTAT 341
|.|||||.|||||||||||.||||||||||| |.|| ||||.||
BL02254___spo 296 GAGGAGGGATTATCGGAGCGCATTCTTTGCT----TGAAACGGATTCGAT 341
BSNT_02530___ 342 TGTTCAAAACGGTGTCATGATTACCAATCAAACAGGGTTTGGAGACCCGA 391
..|..|||||||.|||.|.||.||.|||....|.||.|||||||||||..
BL02254___spo 342 CATGGAAAACGGCGTCTTTATGACGAATTGGTCCGGTTTTGGAGACCCCG 391
BSNT_02530___ 392 TCAGCTGGTTGTTTAT-TGT-TGCTGGCTTTCCAGCATTATGGTTTTTTT 439
||||||||.|||||.| ||| || ||.|||.|.||..|||||.|.||||
BL02254___spo 392 TCAGCTGGCTGTTTGTCTGTGTG--GGTTTTGCGGCTGTATGGCTGTTTT 439
BSNT_02530___ 440 CTAAAAGAAGAATTGAAGATATTGAAACAAAAAACATTCAATATGAGGAA 489
|.||||...|..||||||||..||||.|.||.||.||||||||.||.|||
BL02254___spo 440 CAAAAAAGCGTTTTGAAGATGCTGAAGCGAAGAAAATTCAATACGAAGAA 489
BSNT_02530___ 490 CGAGTCAGCGTGCAGGC--AGATTTGGGCAGCCAAACACTTCATGTCAGA 537
||.|||.||.|..|||| ..|||.|.|.| ||.||.||||||.|||..
BL02254___spo 490 CGCGTCCGCCTAGAGGCCTGCATTGGTGAA--CATACGCTTCATTTCACC 537
BSNT_02530___ 538 GGCCTGATTGATTCCGGTAATCAGCTGTACGATCCTCTTACAAAAACACC 587
||..|||||||.|||||.||.|||||.||||||||..|.||||||||.||
BL02254___spo 538 GGATTGATTGACTCCGGAAACCAGCTCTACGATCCAATCACAAAAACGCC 587
BSNT_02530___ 588 GGTAATGATCATTTACATTGATAAACTGGAGCCGA----TTTTCGGAACA 633
.||.||||||.|..|.|||||.|||.||.| | |.||.|||..|
BL02254___spo 588 CGTCATGATCGTCAATATTGAAAAATTGAA----AGTTGTATTGGGAGAA 633
BSNT_02530___ 634 GCCGAAACGATGATCATTC---GAAACACAGA-CCCATTGGAAGCCATCG 679
|..|.||...|||.|| || |||| .|| |||..|.||.|||.|||
BL02254___spo 634 GAGGCAAGTGTGACCA-TCAAGGAAA---TGAGCCCGCTTGATGCCGTCG 679
BSNT_02530___ 680 AACAGCTCGATGATTC-CTTTCGCTTTTTAGATAAA--------ATGAGG 720
...|.||.|||||..| ||..|| ||.| ||..|.
BL02254___spo 680 GGAAACTGGATGAAGCACTGCCG---------TATATCGGGCGGATCCGC 720
BSNT_02530___ 721 TTGATTCCATACAGGGGAGTTGGTCAGCAAAATCAATTTTTATTATGCGT 770
.|||||||.|||.|.||.||.||.||.||..||||.|||.|..|.||| |
BL02254___spo 721 CTGATTCCGTACCGCGGGGTCGGCCATCAGCATCAGTTTCTGCTCTGC-T 769
BSNT_02530___ 771 TAAA-CCGGATCACGT-AACGATTATGAC-AAAAGAAGAAATGATCTCTG 817
|||| ||||||||.|| ..||.||.| || .|||| ||||.|||| ||
BL02254___spo 770 TAAAGCCGGATCATGTGCTCGTTTGT-ACGGAAAG-AGAAGTGAT---TG 814
BSNT_02530___ 818 CAG---ATAAATGTTTAATCGGCATCAGCACAACAAAGCTGTCGGCAGAT 864
.|| ..|||||..|.||.||||||||||||.||..|||.||.||.||.
BL02254___spo 815 AAGCGCCGAAATGCCTGATTGGCATCAGCACATCACCGCTTTCCGCTGAC 864
BSNT_02530___ 865 GGAGAGTTTGACGCGATTATTCATCCGAAAATGCTTTCGGGCAAGGCTGT 914
||.||.||||||||.||..|.||||||||||||||..|.||.||..|.||
BL02254___spo 865 GGCGAATTTGACGCCATCGTCCATCCGAAAATGCTGGCCGGAAACCCGGT 914
BSNT_02530___ 915 CAAACACGTTTCATAA 930
||||||||||||.|||
BL02254___spo 915 CAAACACGTTTCTTAA 930
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