Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02516 and BL02244

See DNA alignment / Visit BSNT_02516 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence pep-align/BSNT_02516___murB.1.5803.seq
#    -bsequence pep-align/BL02244___murB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02516___murB-BL02244___murB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02516___murB-BL02244___murB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02516___murB
# 2: BL02244___murB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     250/303 (82.5%)
# Similarity:   278/303 (91.7%)
# Gaps:           0/303 ( 0.0%)
# Score: 1314.0
# 
#
#=======================================

BSNT_02516___      1 MEKVIQELKEREVGKVLANEPLANHTTMKIGGPADVLVIPSSVDAVKDIM     50
                     |:||||||||.||||||.||||:||||:||||||||||||..:.||||.|
BL02244___mur      1 MDKVIQELKELEVGKVLENEPLSNHTTIKIGGPADVLVIPKDIQAVKDTM     50

BSNT_02516___     51 DVIKKYDVKWTVIGRGSNLLVLDEGIRGVVIKLGAGLDHLELEGEQVTVG    100
                     .|:||:.||||.||||||||||||||||||||||.||||:|::|||||||
BL02244___mur     51 KVVKKHGVKWTAIGRGSNLLVLDEGIRGVVIKLGQGLDHMEIDGEQVTVG    100

BSNT_02516___    101 GGYSVVRLATSLSKKGLSGLEFAAGIPGSVGGAVYMNAGAHGSDMSEILV    150
                     ||||||||||.:||||||||||||||||||||||||||||||||:|::||
BL02244___mur    101 GGYSVVRLATGISKKGLSGLEFAAGIPGSVGGAVYMNAGAHGSDISKVLV    150

BSNT_02516___    151 KAHILFEDGTIEWLTNEQMDFSYRTSVLQKKRPGVCLEAVLQLEQKDKES    200
                     ||.||||||||||||||:|.||||||:||.||||:|||||||||||:::.
BL02244___mur    151 KALILFEDGTIEWLTNEEMAFSYRTSILQNKRPGICLEAVLQLEQKERDQ    200

BSNT_02516___    201 IVQQMQSNKDYRKNTQPYSSPCAGSIFRNPLPNHAGNLVEKAGLKGYQIG    250
                     ||.|||.||||||.|||.|:||||||||||||.|||.|||:|||||:|||
BL02244___mur    201 IVAQMQKNKDYRKETQPVSNPCAGSIFRNPLPEHAGRLVEEAGLKGHQIG    250

BSNT_02516___    251 GAKISEMHGNFIVNAGGASAKDVLDLIDHVKKTIREKYEIDMHTEVEIIG    300
                     |||:||||||||||||||:||||||||..::|||:|||:|||||||||||
BL02244___mur    251 GAKVSEMHGNFIVNAGGATAKDVLDLIAFIQKTIKEKYDIDMHTEVEIIG    300

BSNT_02516___    301 GNR    303
                     ..|
BL02244___mur    301 EKR    303


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