Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02516 and BL02244
See
Amino acid alignment /
Visit
BSNT_02516 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_02516___murB.1.5803.seq
# -bsequence dna-align/BL02244___murB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02516___murB-BL02244___murB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02516___murB-BL02244___murB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02516___murB
# 2: BL02244___murB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity: 701/933 (75.1%)
# Similarity: 701/933 (75.1%)
# Gaps: 42/933 ( 4.5%)
# Score: 2515.0
#
#
#=======================================
BSNT_02516___ 1 ATGGAGAAAGTGATACAGGAATTAAAAGAACGCGAAGTCGGCAAGGTTCT 50
|||||.||.||||||||.|||||||||||||..|||||||||||.|||||
BL02244___mur 1 ATGGATAAGGTGATACAAGAATTAAAAGAACTTGAAGTCGGCAAAGTTCT 50
BSNT_02516___ 51 TGCAAATGAACCGCTC-GCGAATCATACAACGATGAAAATCGGCGGACCT 99
.|.|||.||.|||||| || ||.|||||||||||.||||||||.|||||.
BL02244___mur 51 GGAAAACGAGCCGCTCAGC-AACCATACAACGATTAAAATCGGAGGACCG 99
BSNT_02516___ 100 GCGGATGTATTGGTCATTCC--AAG-CAGTGTAGATGCTGTTAAAGACAT 146
||.||.||..||||.||||| ||| || |..|.|||||.|||||.|.
BL02244___mur 100 GCTGACGTGCTGGTGATTCCGAAAGACA---TTCAAGCTGTCAAAGATAC 146
BSNT_02516___ 147 CATGGACGTGATTAAAAAATATGATGTGAAGTGGACAGTCATCGGCCGCG 196
.|||.|.||..|.||.||..|.|..||.||||||||.|.|||||||.|.|
BL02244___mur 147 GATGAAGGTTGTCAAGAAGCACGGCGTCAAGTGGACGGCCATCGGCAGAG 196
BSNT_02516___ 197 GATCAAATCTTCTTGTTTTAGATGAAGGAATTAGAGGCGTAGTGATCAAG 246
|.||.||||||||.|||.|.||||||||.||.||||||||.||.||||||
BL02244___mur 197 GCTCGAATCTTCTCGTTCTCGATGAAGGGATAAGAGGCGTCGTCATCAAG 246
BSNT_02516___ 247 CTGGGTGCGGGTCTTGACCATTTGGAGCTTGAAGGGGAACAAGTAACAGT 296
||.||...|||.||.||||||.||||..|.||.||.||.|||||.||.||
BL02244___mur 247 CTCGGCCAGGGACTCGACCATATGGAAATCGACGGCGAGCAAGTGACGGT 296
BSNT_02516___ 297 CGGAGGCGGTTATTCAGTGGTCCGCCTTGCTACA-TCATTGAGCAAAAAA 345
|||.|||||.||.||.||.||..|.|||||.||| .|| |.|||||||||
BL02244___mur 297 CGGCGGCGGCTACTCTGTCGTAAGGCTTGCGACAGGCA-TCAGCAAAAAA 345
BSNT_02516___ 346 GGCCTGTCCGGTTTGGAATTTGCTGCCGGCATTCCAGGATCAGTCGGCGG 395
||.||.|||||..|.||||||||.||.||||||||.||.||.||||||||
BL02244___mur 346 GGGCTTTCCGGCCTTGAATTTGCCGCAGGCATTCCTGGTTCGGTCGGCGG 395
BSNT_02516___ 396 AGCGGTTTATATGAATGCCGGCGCTCACGGTTCTGATATGAGCGAGATTC 445
|||||||||.||||||||||||||.|||||.||.|||||.|||.|..|..
BL02244___mur 396 AGCGGTTTACATGAATGCCGGCGCCCACGGCTCAGATATCAGCAAAGTAT 445
BSNT_02516___ 446 TCGTCAAAGCGCAT--ATTTTATTTGAAGACGGAACGATTGAGTGGCTGA 493
|.||.||| |||| ||..|.|||||||||||||||||.||.|||||||
BL02244___mur 446 TGGTGAAA--GCATTGATCCTTTTTGAAGACGGAACGATCGAATGGCTGA 493
BSNT_02516___ 494 CAAATGAGCAGATGGATTTCAGCTACAGGACATCTGTACTGCAAAAGAAA 543
|.|||||..||||||..|||||||||.|.|||||..|.||.|||||.||.
BL02244___mur 494 CGAATGAAGAGATGGCGTTCAGCTACCGCACATCCATCCTTCAAAACAAG 543
BSNT_02516___ 544 CGCCCGGGCGTTTGCCTTGAAGCTGTTTTGCAGCTGGAGCAGAAGGATAA 593
||.||||||.||||.||||||||.|||.|.||..|||||||.||.|| |.
BL02244___mur 544 CGGCCGGGCATTTGTCTTGAAGCCGTTCTCCAATTGGAGCAAAAAGA-AC 592
BSNT_02516___ 594 GGAATCA-ATCGTTCAGCAAATGCAAAGCAATAAAGACTATAGAAAAAAT 642
|..|||| |||||...|||.|||||.|..||.||||||||..|||||.|.
BL02244___mur 593 GCGATCAGATCGTCGCGCAGATGCAGAAAAACAAAGACTACCGAAAAGAA 642
BSNT_02516___ 643 ACACAGCC-GTATTCAAGCCCTTGTGCGGGAAGCATATTCAGAAATCCGC 691
||.||||| ||.|.||| ||||||.||.||.|||||.||||||||.||||
BL02244___mur 643 ACGCAGCCTGTGTCCAA-CCCTTGCGCAGGCAGCATCTTCAGAAACCCGC 691
BSNT_02516___ 692 TTCC-GAATCAT----GCCGGGAACCTTGTAGAAAAAGCAGGCTTGAAAG 736
|.|| ||| ||| ||||| ||.||.|||.|.||.||.|||||||
BL02244___mur 692 TGCCTGAA-CATGCGGGCCGG----CTAGTTGAAGAGGCTGGTTTGAAAG 736
BSNT_02516___ 737 GATATCAAATCGGCGGTGCAAAGATATCGGAGATGCACGGAAACTTCATC 786
|..||||.||||||||.||||||.|.||||||||||||||.||.|||||.
BL02244___mur 737 GCCATCAGATCGGCGGGGCAAAGGTTTCGGAGATGCACGGCAATTTCATT 786
BSNT_02516___ 787 GTCAATGCGGGAGGAGCATCAGCAAAAGATGTGCTTGATCTCATTGACCA 836
|||||.||.||.||.|||.||||.|||||.||.||||||.|.|||| ||
BL02244___mur 787 GTCAACGCAGGCGGCGCAACAGCGAAAGACGTCCTTGATTTGATTG--CA 834
BSNT_02516___ 837 TGT------GAAAAAGA-CAATCCGTGAAAAATACGAGATTGATATGCAC 879
| | |||||.|| .|| .|||||||||||.||.||.||||||
BL02244___mur 835 T-TCATTCAGAAAACGATTAA----GGAAAAATACGATATCGACATGCAC 879
BSNT_02516___ 880 ACAGAGGTTGAAATCATCGGCGGAAATCGCTGA 912
||.|||||.|||||.|||||.|.|||.||.|.|
BL02244___mur 880 ACTGAGGTCGAAATTATCGGAGAAAAACGGTAA 912
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.