Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02507 and BL02236
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence pep-align/BSNT_02507___pbpB.1.5803.seq
# -bsequence pep-align/BL02236___pbpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02507___pbpB-BL02236___pbpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02507___pbpB-BL02236___pbpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02507___pbpB
# 2: BL02236___pbpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 720
# Identity: 501/720 (69.6%)
# Similarity: 594/720 (82.5%)
# Gaps: 13/720 ( 1.8%)
# Score: 2629.5
#
#
#=======================================
BSNT_02507___ 1 MIQMPKKNKFMNRGAAILSICFALFFFVILGRMAYIQITGKANGEVLATK 50
||||||||||||||||||||||||||:||.|:||.|||.||||||.|
BL02236___pbp 1 ---MPKKNKFMNRGAAILSICFALFFFVIVGRFAFIQATGKVNGEVLAQK 47
BSNT_02507___ 51 ATEQHEKKRTIEASRGSILDRKGKVIAEDTATYKLIAILDKKMTTDVKHP 100
|.||:||||||||.|||||||.|||:|||..||||:||:.:|| .|
BL02236___pbp 48 ANEQYEKKRTIEAHRGSILDRNGKVLAEDATTYKLVAIMSEKM-----KP 92
BSNT_02507___ 101 QHVVNKEKTAEALSKVINLDKADILDILN-KDAKQVEFGSAGRDITYSQK 149
|:|.:|:.|||.|:.::.:|:..:||||| |.|.||||||||||:||:||
BL02236___pbp 93 QYVKDKQLTAEKLAPILGMDEGKVLDILNKKGAFQVEFGSAGRDLTYAQK 142
BSNT_02507___ 150 QKIEKMKLPGISFLRDTKRYYPNGIFASNLIGYAEVDQDTNEISGAMGLE 199
:||||:|||||.|.|||||||||||||||||||:::::.|.|:.|.||||
BL02236___pbp 143 EKIEKLKLPGIVFTRDTKRYYPNGIFASNLIGYSQINEKTGEMQGMMGLE 192
BSNT_02507___ 200 KVLDKYLKERDGYVTYESDKSGWELPNSKNKITAPKNGDNVYLTIDQNIQ 249
|.|:.||||.|||:||::|::||.||||..||.||.|||||||||||.||
BL02236___pbp 193 KTLNDYLKETDGYMTYDTDRTGWRLPNSNEKIKAPNNGDNVYLTIDQKIQ 242
BSNT_02507___ 250 TFLEDSMTKVAQKYNPKKIMAAVVDPKTGKVLAMGQRPSFDPNKRDVTNY 299
.|||||||.|.::|.|||||||||||||||||||||||||:||.||||||
BL02236___pbp 243 AFLEDSMTTVQKEYKPKKIMAAVVDPKTGKVLAMGQRPSFNPNVRDVTNY 292
BSNT_02507___ 300 YNDLISYAYEPGSTMKIFTLAAAMQENVFNANEKYKSGTFEVG--GAPVR 347
||||:||::||||||||||||||:||.|:|..|:||||::.|. ..|::
BL02236___pbp 293 YNDLVSYSFEPGSTMKIFTLAAAIQEGVYNGGEQYKSGSYSVSKKDKPIK 342
BSNT_02507___ 348 DHNRGIGWGPTTYHDGVLRSSNVAFAKLAKEKLGYDRLNQYLHKFNFYQK 397
|||.|.||||.|:::||.||||||||.||.:|||.||.||||.||:||.|
BL02236___pbp 343 DHNGGNGWGPITFNEGVERSSNVAFAILANDKLGTDRFNQYLRKFHFYDK 392
BSNT_02507___ 398 TGIDLPGEVSSKINFKYEFDKASTAYGQASAVTPIQQIQAATAIANDGKM 447
||||||||.:|||||:|..||.|||:||:||||||||:||||||||:|||
BL02236___pbp 393 TGIDLPGEANSKINFEYLRDKVSTAFGQSSAVTPIQQLQAATAIANNGKM 442
BSNT_02507___ 448 MKPYVIDHIVDPDKDKTIYQNKPESAGTPISASTAKKVRDILGEVVTSKI 497
||||||||:||.||:|||||||||..|.||||.|||:||::||:||||:.
BL02236___pbp 443 MKPYVIDHVVDSDKNKTIYQNKPEQVGQPISAKTAKEVRELLGKVVTSEK 492
BSNT_02507___ 498 GTGQAYKIEGFDVAGKTGTAQIAGKGG-YLDGTDNYIFSFMGMAPKDDPE 546
||||.|||||||||||||||||||:.| ||.|.:||:||||||||||||:
BL02236___pbp 493 GTGQPYKIEGFDVAGKTGTAQIAGEDGRYLTGRENYVFSFMGMAPKDDPQ 542
BSNT_02507___ 547 LLIYVAVQQPQLKAGQSSSDPVSEIFNPTMKNSLHYLNIEPTEKSDSDKE 596
||:|||||||||||.::.|.|||:||||.||||||||||.|.|....:|:
BL02236___pbp 543 LLVYVAVQQPQLKATETGSAPVSKIFNPVMKNSLHYLNITPKETEKEEKQ 592
BSNT_02507___ 597 ETKAQTMPDLTDQTVAAAQKKAKEENLTPIVIGSDVAVKEQYPKADEEVL 646
|.|...|||.:.:...:|.|:|:..:|.|:.||..:|||||||||.|.||
BL02236___pbp 593 EEKQLKMPDFSGKRAESAAKEAQGSSLVPVTIGDGLAVKEQYPKAGEAVL 642
BSNT_02507___ 647 TNQKVFLKTGGKIKMPDMTGWSRREVLQYGELAGIHIEVSGQGYAVSQSV 696
.||:|||||.|||.:|||||||:|:.|::|.:||||||.|||||..||:|
BL02236___pbp 643 PNQRVFLKTDGKITLPDMTGWSKRDALRFGAMAGIHIETSGQGYVKSQNV 692
BSNT_02507___ 697 KKDKEIKDKTVIKVKFKNPD 716
|..||:|..:|:||:.||.
BL02236___pbp 693 KAGKELKANSVVKVRLKNE- 711
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