Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02507 and BL02236
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_02507___pbpB.1.5803.seq
# -bsequence dna-align/BL02236___pbpB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02507___pbpB-BL02236___pbpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02507___pbpB-BL02236___pbpB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02507___pbpB
# 2: BL02236___pbpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2257
# Identity: 1551/2257 (68.7%)
# Similarity: 1551/2257 (68.7%)
# Gaps: 227/2257 (10.1%)
# Score: 5141.0
#
#
#=======================================
BSNT_02507___ 1 ATGATTCAAATGCCAAAAAAGAATAAATTTATGAATAGAGGAGCAGCGAT 50
|||||.|||||.||||||||.|||||.||||||||.||.||
BL02236___pbp 1 ---------ATGCCGAAAAAAAATAAATTCATGAACAGAGGAGCGGCAAT 41
BSNT_02507___ 51 TCTAAGTATTTGTTTCGCTCTCTTTTTCTTTGTCATCCTGGGGAGAATGG 100
.||.||.||||||||.||.||||||||||||||||||.|.||..|..|.|
BL02236___pbp 42 ACTCAGCATTTGTTTTGCCCTCTTTTTCTTTGTCATCGTAGGACGGTTTG 91
BSNT_02507___ 101 CATATATTCAAATAACCGGAAAAGCGAACGGCGAAGTGCTTGCGACA-AA 149
|.|.|||||||...||.|||||||.||||||||||||||||||| || ||
BL02236___pbp 92 CGTTTATTCAAGCGACGGGAAAAGTGAACGGCGAAGTGCTTGCG-CAGAA 140
BSNT_02507___ 150 AGCGACAGAGCAGCATGAAAAGAAACGGACCATCGAAGCGAGCCGCGGCT 199
.||||..||.|||.||||.||.||.|||||.||||||||...|||.||.|
BL02236___pbp 141 GGCGAACGAACAGTATGAGAAAAAGCGGACGATCGAAGCCCACCGAGGAT 190
BSNT_02507___ 200 CGATTTTAGACCGAAAAGGAAAAGTCATTGCAGAGGACACAGCGACGTAT 249
||||..|.|||||.||.||||||||..||||.||.||..|..||||.|||
BL02236___pbp 191 CGATCCTTGACCGGAACGGAAAAGTGCTTGCCGAAGATGCTACGACATAT 240
BSNT_02507___ 250 AAACTGATTGCGATTCT---CGATAAAAAAATGACCACTGATGTCAAGCA 296
||.||..|.||||||.| || ||||.|||| |
BL02236___pbp 241 AAGCTTGTCGCGATTATGAGCG---AAAAGATGA---------------A 272
BSNT_02507___ 297 TCCTCAGCATGTTGTAAACAAAGAAAAAACGGCGGA-AGCATTGTCTAAA 345
.|||||..|.||| |||.|.||.|.||.|| |||
BL02236___pbp 273 GCCTCAATACGTT-------AAGGACAAGCAGCTGACAGC---------- 305
BSNT_02507___ 346 GTGATAAACT-----------------TGGACAAGGCCGACA-TCCTTGA 377
|||.||.|| ||||..||| .||.| |.||.||
BL02236___pbp 306 -TGAGAAGCTCGCGCCGATCCTCGGCATGGATGAGG-GGAAAGTGCTCGA 353
BSNT_02507___ 378 TATCTTAAATAAAGATGCAAAA---------CAAGTCGAGTTTGGCTCAG 418
|||..||||||| |||| ||.|||||.||.||.||.|
BL02236___pbp 354 TATTCTAAATAA------AAAAGGAGCGTTTCAGGTCGAATTCGGATCGG 397
BSNT_02507___ 419 CTGGCCGGGATATTACGTATTCACAAAAGCAAAAAATTGAAAAAATGAAA 468
|.||.||||||.|.||.||..|.|||||..|.|||||.|||||..||||.
BL02236___pbp 398 CGGGACGGGATTTGACATACGCCCAAAAAGAGAAAATCGAAAAGCTGAAG 447
BSNT_02507___ 469 CTCCCGGGCAT----TTCATTTTTGCGGGATACAAAACGCTACTATCCAA 514
||.|||||||| |||| ..||.|||||.||.|||||||||||||
BL02236___pbp 448 CTGCCGGGCATCGTGTTCA----CCCGCGATACGAAGCGCTACTATCCAA 493
BSNT_02507___ 515 ATGGTATTTTCGCATCCAATTTAATCGGCTATGCCGAGGTTGATCAA-GA 563
|.||.||.|||||.|||||..|.|||||||||.| |..|||||| ||
BL02236___pbp 494 ACGGAATCTTCGCCTCCAACCTCATCGGCTATTC----GCAGATCAACGA 539
BSNT_02507___ 564 CACAAA----TGAAATTTCCGGCGCGATGGGGTTAGAAAAAGTGCTGGAT 609
|.||| ||||||....|||..||||||..|.||||||..||||.|.
BL02236___pbp 540 -AAAAACGGGTGAAATGCAAGGCATGATGGGCCTTGAAAAAACGCTGAAC 588
BSNT_02507___ 610 AAGTATTTG-AAGGAGCGCGACGGATATGTGACATATGAAAGCGACAAAT 658
.|.|||||| |||.|.|| ||||||||..||||.||.||.|.|||||.|.
BL02236___pbp 589 GATTATTTGAAAGAAACG-GACGGATACATGACGTACGATACCGACAGAA 637
BSNT_02507___ 659 CCGGCTGGGAGCTCCCGAACAGCAAAAATAAAATTACAGCGCCAAAAAAT 708
|.||||||...||.|||||||||||..|.||.||||.|||||||||.||.
BL02236___pbp 638 CGGGCTGGCGCCTGCCGAACAGCAATGAAAAGATTAAAGCGCCAAACAAC 687
BSNT_02507___ 709 GGTGACAATGTATATTTAACCATTGACCAGAATATTCAAACCTTTTTGGA 758
||.|||||.||.|||||.||.||.||.||.||.||.||..|.||||||||
BL02236___pbp 688 GGAGACAACGTGTATTTGACGATCGATCAAAAAATCCAGGCGTTTTTGGA 737
BSNT_02507___ 759 AGACAGTATGACAAAAGTGGCGCAAA---AGTATAATCCGAAAAAAATCA 805
||||||.|||||.|..|| .|||| ||||.||.||||||||.||.|
BL02236___pbp 738 AGACAGCATGACGACCGT---TCAAAAAGAGTACAAGCCGAAAAAGATTA 784
BSNT_02507___ 806 TGGCCGCAGTCGTTGATCCGAAAACGGGCAAAGTCCTTGCCATGGGACAG 855
||||.||.||.|||||||||||||||||||||||.|||||.|||||.||.
BL02236___pbp 785 TGGCGGCGGTTGTTGATCCGAAAACGGGCAAAGTGCTTGCGATGGGGCAA 834
BSNT_02507___ 856 CGCCCAAGCTTTGATCCGAACAAGCGCGATGTGACAAACTACTATAATGA 905
.|.||.|||||..|.||||||..|||||||||.||.|||||.||.||.||
BL02236___pbp 835 AGGCCGAGCTTCAACCCGAACGTGCGCGATGTCACGAACTATTACAACGA 884
BSNT_02507___ 906 -TTTGATTTCATA-TGCGTATGAGCCCGGATCAACGATGAAGATCTTTAC 953
.||| |.||.|| .|| |.||||||.||.||.|||||||||||.||.||
BL02236___pbp 885 CCTTG-TCTCCTACAGC-TTTGAGCCGGGCTCGACGATGAAGATTTTCAC 932
BSNT_02507___ 954 ACTCGCTGCTGCGATGCAGGAAAACGTGTTTAATG--CGAACGAAAAATA 1001
|.|.||.||.||.||.||.|||..|||.|.||||| .|| |||.||||
BL02236___pbp 933 ATTGGCGGCGGCCATCCAAGAAGGCGTATATAATGGAGGA--GAACAATA 980
BSNT_02507___ 1002 TAAATCAGGGACATTTGAAGTT-------------GGCGGAGCACCTGTC 1038
.||.||.||..|||.|...||| .||.|| ||
BL02236___pbp 981 CAAGTCTGGATCATATTCGGTTTCTAAAAAAGATAAGCCGA-------TC 1023
BSNT_02507___ 1039 AGGGACCATAATAGAGGAATAGGCTGGGGACCGACAACCTATCATGACGG 1088
|..||||||||..|.||||..||||||||.||||..||.|.|.||||.||
BL02236___pbp 1024 AAAGACCATAACGGTGGAAACGGCTGGGGCCCGATCACTTTTAATGAAGG 1073
BSNT_02507___ 1089 CGTTCTAAGATCGTCGAATGTCGCTTTTGCGAAACTGGCGAAAGAAAAGC 1138
.|||..|.|.||.||.||.|||||.|||||||..||.||.||.||.||.|
BL02236___pbp 1074 TGTTGAACGCTCCTCAAACGTCGCGTTTGCGATCCTTGCCAACGATAAAC 1123
BSNT_02507___ 1139 TGGGATATGACCGCCTCAATCAATATTTGCACAAATTCAATTTTTACCAG 1188
|.||....|||||..|||||||||||||||..||||||.||||||||.|.
BL02236___pbp 1124 TCGGCACGGACCGGTTCAATCAATATTTGCGGAAATTCCATTTTTACGAC 1173
BSNT_02507___ 1189 AAAACAGGTATTGATTTGCCTGGAGAAGTCTCCAGCAAAATCAACTTTAA 1238
|||||.||.|||||..|||||||.||||....||||||||||||||||.|
BL02236___pbp 1174 AAAACGGGGATTGACCTGCCTGGGGAAGCGAACAGCAAAATCAACTTTGA 1223
BSNT_02507___ 1239 ATATGAATTT----GATAAGGCGTCAACTGCATATGGCCA-AGCGTCTGC 1283
|| |||| |||||.|.|||.||.||.|.|||.|| ||| |||||
BL02236___pbp 1224 AT----ATTTGCGGGATAAAGTGTCGACGGCTTTTGGACAGAGC-TCTGC 1268
BSNT_02507___ 1284 GGTCACACCAATTCAGCAGATTCAGGCCGCAACGGCAATTGCAAATGACG 1333
.|||||.||.||.||||||.||||||||||.|||||.||.||.|||.|||
BL02236___pbp 1269 TGTCACGCCGATCCAGCAGCTTCAGGCCGCGACGGCGATCGCCAATAACG 1318
BSNT_02507___ 1334 GCAAAATGATGAAACCTTATGTGATTGACCATATCGTTGATCCCGATAAA 1383
|.|||||||||||.|||||||||||.||.|||.||||||||.|.||.|||
BL02236___pbp 1319 GAAAAATGATGAAGCCTTATGTGATCGATCATGTCGTTGATTCTGACAAA 1368
BSNT_02507___ 1384 GATAAAACTATTTATCAAAATAAGCCGGAATCAGCCGGAACC--CCAATT 1431
.|.|||||.||||||||||||||.||||||..||.||| || ||.||.
BL02236___pbp 1369 AACAAAACGATTTATCAAAATAAACCGGAACAAGTCGG--CCAGCCGATC 1416
BSNT_02507___ 1432 TCTGCAAGCACAGCGAAAAAGGTGCGGGATATATTGGGAGAAGTTGTTAC 1481
|||||.|..||.||.|||.|.|||||.||..|.||||||.||||.||.||
BL02236___pbp 1417 TCTGCCAAAACGGCAAAAGAAGTGCGCGAGCTGTTGGGAAAAGTCGTCAC 1466
BSNT_02507___ 1482 GTC-GAAAATCGGAACAGGGCAAGCATATAAAATCGAAGGTTTTGATGTT 1530
.|| ||||| .|||||.|||||..|.||.||.||||||||.||||||||.
BL02236___pbp 1467 ATCTGAAAA-AGGAACGGGGCAGCCGTACAAGATCGAAGGATTTGATGTC 1515
BSNT_02507___ 1531 GCCGGGAAAACAGGTACTGCGCAAATAGCCGGTAAA---GGCGGATATTT 1577
|||||.|||||.|||||.||||||||.|||||..|| |||.|||||||
BL02236___pbp 1516 GCCGGAAAAACCGGTACGGCGCAAATTGCCGGAGAAGACGGCAGATATTT 1565
BSNT_02507___ 1578 AGA-CGGCACAGATAACTATATCTTTTCTTTTATGGGTATGGCGCCAAAA 1626
|| ||||...||.|||||..|.||.||.||.|||||.|||||.||.||.
BL02236___pbp 1566 -GACCGGCCGCGAAAACTACGTGTTCTCCTTCATGGGCATGGCCCCGAAG 1614
BSNT_02507___ 1627 GATGATCCTGAGCTTTTAATTTATGTTGCTGTACAGCAGCCGCAACTAAA 1676
||.|||||..|||||.|..|||||||.||.||.||||||||||||.||||
BL02236___pbp 1615 GACGATCCGCAGCTTCTCGTTTATGTGGCCGTGCAGCAGCCGCAATTAAA 1664
BSNT_02507___ 1677 AGC--AGGACAAAGCAGTTCAGATCCAGTATCAGAAATCTTCAATCCAAC 1724
||| .|||.|.|| |.||.|.|||.||.|||.||||.||||||||...
BL02236___pbp 1665 AGCTACGGAAACAG--GCTCTGCTCCGGTGTCAAAAATTTTCAATCCGGT 1712
BSNT_02507___ 1725 AATGAAAAATAGCCTGCACTACCTAAACATCGAACC------AACTGAAA 1768
.||||||||.||.||.||||||.||||.|||..||| .|||||||
BL02236___pbp 1713 GATGAAAAACAGTCTTCACTACTTAAATATCACACCGAAAGAGACTGAAA 1762
BSNT_02507___ 1769 AATCTGACTCAGATAAGGAAGAAACAAAAGCGCAGACAATGCCTGATTTA 1818
|| || |||.|||.|.|||..||||..||.||.||||||||||||.
BL02236___pbp 1763 AA---GA---AGAAAAGCAGGAAGAAAAACAGCTGAAAATGCCTGATTTC 1806
BSNT_02507___ 1819 ACAGATCAAACGGTAGCTG---CTGCTCAAAAGAAAGCAAAAGAGGAGAA 1865
.|.| .|||||| |||.| |.|| .||||||||||
BL02236___pbp 1807 TCCG-GCAAACG--AGCCGAATCCGC---------CGCAAAAGAGG---- 1840
BSNT_02507___ 1866 TCTCA---CACCA--ATTGT---------CATCGGCAGTGATG---TCGC 1898
|.|| ||.|| .|||| .|||||| |||| |.||
BL02236___pbp 1841 -CGCAAGGCAGCAGCCTTGTTCCCGTTACGATCGGC---GATGGCTTGGC 1886
BSNT_02507___ 1899 TGTAAAAGAACAGTATCCGAAAGCGGATGAGGAAGTTCTCACCAATCAAA 1948
|||.|||||||||||.||||||||||..||.|..||.||..|.||.|||.
BL02236___pbp 1887 TGTGAAAGAACAGTACCCGAAAGCGGGCGAAGCCGTCCTGCCGAACCAAC 1936
BSNT_02507___ 1949 AGGTCTTCCTGAAAACGGGCGGCAAAATCAAAATGCCTGATATGACAGGC 1998
.|||||||||||||||.|.|||.|||||||.|.|.||.||||||||||||
BL02236___pbp 1937 GGGTCTTCCTGAAAACCGACGGGAAAATCACACTCCCAGATATGACAGGC 1986
BSNT_02507___ 1999 TGGTCGAGAAGAGAGGTTCTGCAGTACGGCGAGCTCGCGGGAATTCATAT 2048
|||||.|.|.|.||.|..||.|..|.|||||...|.||.||.||||||||
BL02236___pbp 1987 TGGTCAAAACGGGACGCCCTCCGCTTCGGCGCCATGGCAGGCATTCATAT 2036
BSNT_02507___ 2049 TGAAGTAAGCGGACAAGGCTACGCTGT---CAGCCAAAGTGTTAAGAAAG 2095
.|||...|||||.||.||||| ||| .||.||||.|||.||...||
BL02236___pbp 2037 CGAAACGAGCGGCCAGGGCTA---TGTGAAGAGTCAAAATGTAAAAGCAG 2083
BSNT_02507___ 2096 ACAAAGAAATCAAAGACAAA-ACCGTAATCAAGGTTAAGTTTAAAAATCC 2144
.|||||||.|.|||| |||| .|.||..|.||.||.|..||.|||||
BL02236___pbp 2084 GCAAAGAATTAAAAG-CAAATTCAGTCGTGAAAGTCAGATTGAAAAA--- 2129
BSNT_02507___ 2145 TGATTAA 2151
.||.||.
BL02236___pbp 2130 CGAATAG 2136
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