Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03427 and BL02233

See DNA alignment / Visit BSNT_03427 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:23
# Commandline: needle
#    -asequence pep-align/BSNT_03427___ypbB.1.5803.seq
#    -bsequence pep-align/BL02233.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03427___ypbB-BL02233.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03427___ypbB-BL02233.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03427___ypbB
# 2: BL02233
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 353
# Identity:     173/353 (49.0%)
# Similarity:   243/353 (68.8%)
# Gaps:           2/353 ( 0.6%)
# Score: 865.0
# 
#
#=======================================

BSNT_03427___      1 MSLNYFDIMVLDCLCKINGERSGSAVFHLFKGKRSSQTIQDAGLFQTAKY     50
                     |.:::||.:|||.|..:.||||.|||:||.|||||||||||||||..:||
BL02233            1 MPVHFFDAIVLDILSSMKGERSPSAVYHLLKGKRSSQTIQDAGLFAVSKY     50

BSNT_03427___     51 FGMAAQCSRSDVSESLDKLEKHSYLSPMSETDTYKVTASGAAVLRHALSE    100
                     ||..:..||..|:.|:.:|::.|.:...:|:..|.||..|.|.|....:.
BL02233           51 FGFCSALSREQVAASVQRLKQESLVREKAESGAYTVTEKGEAELAGFFAL    100

BSNT_03427___    101 RPWPVHCHGAHYQQAAGVLWKRLSLLVQVLSHKQQGSRQYIPVTKDHKTL    150
                     .|||.|.||.:||.||.|:|.|:|||:||||:|....|.|:|:.||::..
BL02233          101 YPWPRHFHGGYYQAAAKVMWARMSLLIQVLSNKLYRERVYLPIVKDYQIQ    150

BSNT_03427___    151 HWVKKYLSRHTDHIEMAKSLFAMLEAHLKKI-ENKAAQIFVYSLTSHHRI    199
                     :|||:|| |:.:..|.|......|:..|..: .::.|.|||:||||..:.
BL02233          151 NWVKQYL-RNRNAAETAAQFHQELKEKLSVLNHDEQAAIFVHSLTSRTKA    199

BSNT_03427___    200 GYTSRQLADTLKEDEWYVYIMFWASVHYFIHSLPECEDALLKDLLSDVHL    249
                     |||.|||::.:..||||:|.:||..:|:||.|....|..|.:.|:.|:.|
BL02233          200 GYTFRQLSEKMNLDEWYIYALFWDVLHHFIQSAQNGESPLFQTLIHDIPL    249

BSNT_03427___    250 DNALTESTRKTWQMVKQGFPIHRIAEIRKLKTATIEDHIVEISLHEPAFM    299
                     ::.||:|||||..::|:|:.|.|||:|||||.||||||||||::|:|:|.
BL02233          250 NDGLTQSTRKTLFLIKEGYTIDRIAKIRKLKLATIEDHIVEIAIHDPSFS    299

BSNT_03427___    300 INDYVSAEDQLQIAEFAKRMRTNKIKQIRDGLEQRFSYFQIRLALTKQVQ    349
                     |:.|||.|:|..||::|...:||||:||::||..|:|||:|||||:|.|.
BL02233          300 IDQYVSKEEQKIIADYAIANQTNKIRQIKEGLGGRYSYFKIRLALSKTVI    349

BSNT_03427___    350 QYD    352
                     :..
BL02233          350 RNG    352


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